Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC4O75487 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 ECM1P2-201ENST00000503354 1577 ntBASIC4.88□□□□□ -1.63
GPC4O75487 OR14L1P-202ENST00000641545 3009 ntBASIC4.88□□□□□ -1.63
GPC4O75487 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 RNU6-207P-201ENST00000384137 107 ntBASIC4.88□□□□□ -1.63
GPC4O75487 SNORA70.10-201ENST00000384515 134 ntBASIC4.88□□□□□ -1.63
GPC4O75487 RNU6-1257P-201ENST00000384625 110 ntBASIC4.88□□□□□ -1.63
GPC4O75487 MIR105-2-201ENST00000385083 81 ntBASIC4.88□□□□□ -1.63
GPC4O75487 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GPC4O75487 RNU6-1000P-201ENST00000391066 106 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC4O75487 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 Z97832.1-201ENST00000402490 328 ntBASIC4.88□□□□□ -1.63
GPC4O75487 HMGB3P19-201ENST00000403971 560 ntBASIC4.88□□□□□ -1.63
GPC4O75487 VTA1P1-201ENST00000414044 866 ntBASIC4.88□□□□□ -1.63
GPC4O75487 TCEA1P4-201ENST00000415066 844 ntBASIC4.88□□□□□ -1.63
GPC4O75487 TMBIM7P-201ENST00000418074 855 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 DEFB130D-201ENST00000426866 237 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 ETF1P3-201ENST00000430422 1160 ntBASIC4.88□□□□□ -1.63
GPC4O75487 MTCO3P21-201ENST00000430791 643 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC4O75487 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 RPL7P33-201ENST00000444159 742 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 RPL6P5-201ENST00000445678 828 ntBASIC4.88□□□□□ -1.63
GPC4O75487 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC4O75487 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 AC119751.4-201ENST00000507498 357 ntBASIC4.88□□□□□ -1.63
GPC4O75487 ENPP7P9-201ENST00000514456 627 ntBASIC4.88□□□□□ -1.63
GPC4O75487 RNU6-347P-201ENST00000516658 105 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC4O75487 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 AC025260.1-201ENST00000548858 430 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.88□□□□□ -1.63
GPC4O75487 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 AC087763.1-201ENST00000603391 286 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC087283.1-201ENST00000604029 1074 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AC104687.2-201ENST00000604442 342 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AL445222.1-201ENST00000607259 628 ntBASIC4.88□□□□□ -1.63
GPC4O75487 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 AP001005.3-201ENST00000622049 129 ntBASIC4.88□□□□□ -1.63
GPC4O75487 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.88□□□□□ -1.63
GPC4O75487 AC132825.7-201ENST00000638744 335 ntBASIC4.88□□□□□ -1.63
GPC4O75487 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
GPC4O75487 MTCO1P18-201ENST00000455518 1419 ntBASIC4.88□□□□□ -1.63
GPC4O75487 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC4O75487 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC4O75487 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC4O75487 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
GPC4O75487 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GPC4O75487 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 METTL21EP-201ENST00000298105 713 ntBASIC4.87□□□□□ -1.63
GPC4O75487 SNORA73.1-201ENST00000363107 205 ntBASIC4.87□□□□□ -1.63
GPC4O75487 SNORA62.2-201ENST00000364672 152 ntBASIC4.87□□□□□ -1.63
GPC4O75487 RNU6-468P-201ENST00000384003 109 ntBASIC4.87□□□□□ -1.63
GPC4O75487 RNU6-98P-201ENST00000384173 107 ntBASIC4.87□□□□□ -1.63
GPC4O75487 RN7SKP278-201ENST00000410504 342 ntBASIC4.87□□□□□ -1.63
GPC4O75487 UBE2V1P11-201ENST00000411559 285 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC048351.1-201ENST00000420064 602 ntBASIC4.87□□□□□ -1.63
GPC4O75487 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC4O75487 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 CEACAMP7-201ENST00000444105 496 ntBASIC4.87□□□□□ -1.63
GPC4O75487 ARL5AP2-201ENST00000444698 533 ntBASIC4.87□□□□□ -1.63
GPC4O75487 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC4O75487 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 RPL7AP6-201ENST00000477943 801 ntBASIC4.87□□□□□ -1.63
GPC4O75487 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GPC4O75487 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 MTATP6P9-201ENST00000515039 680 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.87□□□□□ -1.63
GPC4O75487 AP003717.3-201ENST00000544832 1180 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GPC4O75487 AC126365.2-201ENST00000580630 379 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.87□□□□□ -1.63
GPC4O75487 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.87□□□□□ -1.63
GPC4O75487 AC008507.2-201ENST00000588402 1176 ntBASIC4.87□□□□□ -1.63
GPC4O75487 ZNF92P3-201ENST00000596594 954 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AL158050.2-201ENST00000605336 568 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC023813.4-201ENST00000607580 580 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AC104763.3-201ENST00000613765 618 ntBASIC4.87□□□□□ -1.63
GPC4O75487 AL049794.2-201ENST00000616301 365 ntBASIC4.87□□□□□ -1.63
GPC4O75487 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms