Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.45□□□□□ -1.22
CUX2O14529 U3.45-201ENST00000607547 219 ntBASIC7.45□□□□□ -1.22
CUX2O14529 AC107294.1-201ENST00000609524 467 ntBASIC7.45□□□□□ -1.22
CUX2O14529 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.45□□□□□ -1.22
CUX2O14529 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUX2O14529 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUX2O14529 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CUX2O14529 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CUX2O14529 AL445487.1-201ENST00000415694 1580 ntBASIC7.45□□□□□ -1.22
CUX2O14529 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
CUX2O14529 RNU11-4P-201ENST00000391149 133 ntBASIC7.44□□□□□ -1.22
CUX2O14529 CTSL3P-202ENST00000412179 788 ntBASIC7.44□□□□□ -1.22
CUX2O14529 AL590609.2-201ENST00000421430 368 ntBASIC7.44□□□□□ -1.22
CUX2O14529 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.44□□□□□ -1.22
CUX2O14529 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.44□□□□□ -1.22
CUX2O14529 AC104306.1-201ENST00000449702 371 ntBASIC7.44□□□□□ -1.22
CUX2O14529 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.44□□□□□ -1.22
CUX2O14529 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.44□□□□□ -1.22
CUX2O14529 AC015912.2-201ENST00000571053 181 ntBASIC7.44□□□□□ -1.22
CUX2O14529 AC120057.2-201ENST00000571520 271 ntBASIC7.44□□□□□ -1.22
CUX2O14529 AL354984.3-201ENST00000604803 325 ntBASIC7.44□□□□□ -1.22
CUX2O14529 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUX2O14529 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.44□□□□□ -1.22
CUX2O14529 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUX2O14529 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.44□□□□□ -1.22
CUX2O14529 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CUX2O14529 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.44□□□□□ -1.22
CUX2O14529 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC7.44□□□□□ -1.22
CUX2O14529 RPL6P29-201ENST00000414863 865 ntBASIC7.43□□□□□ -1.22
CUX2O14529 CKS1BP6-201ENST00000424932 240 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AL157831.1-201ENST00000426134 473 ntBASIC7.43□□□□□ -1.22
CUX2O14529 RHEBP2-201ENST00000450289 600 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.43□□□□□ -1.22
CUX2O14529 RNA5SP246-201ENST00000458909 119 ntBASIC7.43□□□□□ -1.22
CUX2O14529 NPM1P28-201ENST00000492269 840 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.43□□□□□ -1.22
CUX2O14529 AC090181.2-201ENST00000602975 672 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AC010680.3-201ENST00000604215 520 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUX2O14529 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUX2O14529 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUX2O14529 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.43□□□□□ -1.22
CUX2O14529 RN7SKP235-201ENST00000410662 305 ntBASIC7.43□□□□□ -1.22
CUX2O14529 RPL7P4-203ENST00000430239 730 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 AC114495.1-201ENST00000441274 436 ntBASIC7.43□□□□□ -1.22
CUX2O14529 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.43□□□□□ -1.22
CUX2O14529 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.43□□□□□ -1.22
CUX2O14529 AC015804.1-201ENST00000622935 435 ntBASIC7.43□□□□□ -1.22
CUX2O14529 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.43□□□□□ -1.22
CUX2O14529 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUX2O14529 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CUX2O14529 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUX2O14529 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CUX2O14529 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.42□□□□□ -1.22
CUX2O14529 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUX2O14529 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUX2O14529 RN7SKP156-201ENST00000410308 342 ntBASIC7.42□□□□□ -1.22
CUX2O14529 HMGN2P27-201ENST00000427352 270 ntBASIC7.42□□□□□ -1.22
CUX2O14529 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUX2O14529 RN7SL293P-201ENST00000481765 281 ntBASIC7.42□□□□□ -1.22
CUX2O14529 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.42□□□□□ -1.22
CUX2O14529 AL136164.3-201ENST00000624429 3978 ntBASIC7.41□□□□□ -1.22
CUX2O14529 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUX2O14529 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUX2O14529 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUX2O14529 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.41□□□□□ -1.22
CUX2O14529 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC7.41□□□□□ -1.22
CUX2O14529 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUX2O14529 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CUX2O14529 AL512649.1-201ENST00000428997 581 ntBASIC7.41□□□□□ -1.22
CUX2O14529 RPL7P28-201ENST00000437739 740 ntBASIC7.41□□□□□ -1.22
CUX2O14529 AC104651.2-201ENST00000447549 528 ntBASIC7.41□□□□□ -1.22
CUX2O14529 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CUX2O14529 AK4P6-201ENST00000505168 528 ntBASIC7.41□□□□□ -1.22
CUX2O14529 FTH1P9-201ENST00000513251 355 ntBASIC7.41□□□□□ -1.22
CUX2O14529 RN7SKP57-201ENST00000517248 293 ntBASIC7.41□□□□□ -1.22
CUX2O14529 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.41□□□□□ -1.22
CUX2O14529 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.41□□□□□ -1.22
CUX2O14529 AC087477.6-201ENST00000559595 843 ntBASIC7.41□□□□□ -1.22
CUX2O14529 ELOCP35-201ENST00000604289 336 ntBASIC7.41□□□□□ -1.22
CUX2O14529 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.41□□□□□ -1.22
CUX2O14529 MIR7151-201ENST00000617477 60 ntBASIC7.41□□□□□ -1.22
CUX2O14529 MTCO1P12-201ENST00000414273 1543 ntBASIC7.41□□□□□ -1.22
CUX2O14529 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.41□□□□□ -1.22
CUX2O14529 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.41□□□□□ -1.22
CUX2O14529 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CUX2O14529 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.4□□□□□ -1.22
CUX2O14529 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
CUX2O14529 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CUX2O14529 RNU6-213P-201ENST00000384051 104 ntBASIC7.4□□□□□ -1.22
CUX2O14529 EIF4HP2-201ENST00000424380 563 ntBASIC7.4□□□□□ -1.22
CUX2O14529 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.4□□□□□ -1.22
CUX2O14529 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.4□□□□□ -1.22
CUX2O14529 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.4□□□□□ -1.22
CUX2O14529 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms