Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CR381670.1-201ENST00000624291 1693 ntBASIC6.06□□□□□ -1.44
CCDC66A2RUB6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC66A2RUB6 AC106872.5-201ENST00000508856 1416 ntBASIC6.06□□□□□ -1.44
CCDC66A2RUB6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC66A2RUB6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC66A2RUB6 AL354854.1-201ENST00000455940 1363 ntBASIC6.06□□□□□ -1.44
CCDC66A2RUB6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 LINC01355-201ENST00000566551 5444 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC087359.1-201ENST00000508335 1740 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 MTND4P31-201ENST00000425607 1343 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AL391994.1-201ENST00000254724 282 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AL078595.1-201ENST00000404458 226 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 RPS3AP44-201ENST00000425466 790 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 TPMTP4-201ENST00000450749 678 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 RBMY2TP-201ENST00000451162 947 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 SNORD125-201ENST00000459538 96 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC021660.1-201ENST00000465006 554 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 RPS7P6-201ENST00000485777 579 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC005178.1-201ENST00000508392 440 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC008885.2-201ENST00000509506 930 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC079395.1-201ENST00000510981 262 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC010587.2-201ENST00000511727 448 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC109445.1-201ENST00000512356 383 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC098976.1-201ENST00000513014 541 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 HMGB1P19-201ENST00000517578 577 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 OR5AZ1P-201ENST00000527448 943 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC006512.2-201ENST00000543250 486 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AL121766.1-201ENST00000547436 487 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AL391156.1-201ENST00000554965 554 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC090888.3-201ENST00000558917 509 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 DEFB131E-202ENST00000602581 683 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC009220.3-201ENST00000604318 586 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 RN7SKP299-201ENST00000606679 301 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC097505.1-201ENST00000610199 565 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC023158.2-201ENST00000614876 543 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AL158063.1-201ENST00000615349 536 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC006840.1-201ENST00000623069 542 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.05□□□□□ -1.44
CCDC66A2RUB6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC66A2RUB6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 RNU6-1200P-201ENST00000384162 107 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AL031577.2-201ENST00000404133 280 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 SNORA11C-201ENST00000408532 129 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MIR1271-201ENST00000408537 86 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 RNA5SP80-201ENST00000410475 111 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 IFNNP1-201ENST00000429219 553 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MTCO1P54-201ENST00000430139 712 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC245028.2-201ENST00000458673 253 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 MYL12BP2-201ENST00000503948 512 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 HNRNPKP5-201ENST00000515300 253 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 RNU6-416P-201ENST00000516265 103 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC005363.1-201ENST00000530779 351 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 POLR2KP1-201ENST00000553226 168 ntBASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC66A2RUB6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms