Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC022164.1-201ENST00000568767 2673 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 OR9K1P-201ENST00000326513 941 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNA5SP350-201ENST00000363298 111 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNU6-1322P-201ENST00000364309 107 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RPL23AP17-201ENST00000401064 499 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL121835.1-201ENST00000404250 354 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNU6-908P-201ENST00000410160 94 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNA5SP231-201ENST00000410496 138 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNU2-8P-201ENST00000410727 190 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNA5SP280-201ENST00000411230 115 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 SNX18P13-201ENST00000412442 529 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC015977.1-201ENST00000418887 292 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC234781.4-201ENST00000419384 244 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 FDPSP6-201ENST00000425091 512 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC023347.2-201ENST00000433994 462 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RPL14P5-201ENST00000436474 730 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL031663.1-201ENST00000437445 219 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RPL22P17-201ENST00000438729 315 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 HMGB3P12-201ENST00000438745 556 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 SDCBPP1-201ENST00000440192 890 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RPL17P49-201ENST00000443728 411 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL353803.3-201ENST00000444641 335 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 MTND1P12-201ENST00000455231 147 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 BTF3P5-201ENST00000457252 467 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC013356.1-201ENST00000489027 564 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RPL39P36-201ENST00000490784 156 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL035690.1-201ENST00000490892 383 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC114967.1-201ENST00000504890 259 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 MRPL49P1-201ENST00000505951 535 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC109481.1-201ENST00000509173 282 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC091849.1-201ENST00000509920 121 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 RNA5SP75-201ENST00000516841 111 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 SNRPCP6-201ENST00000528310 210 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PMS2P3-207ENST00000529061 717 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 OR4A12P-201ENST00000530847 918 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC103855.4-201ENST00000533158 265 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL389895.1-201ENST00000554127 252 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC107954.1-201ENST00000565906 727 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC013553.2-201ENST00000604244 589 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC007621.1-201ENST00000604544 437 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 Z95327.3-201ENST00000610385 572 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC135507.2-201ENST00000612443 309 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 pRNA.9-201ENST00000618609 89 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC092692.1-201ENST00000623625 2595 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms