Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL450326.2-201ENST00000421913 1962 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 Z95327.2-201ENST00000414579 1873 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RAD1P1-201ENST00000231383 813 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RNU1-83P-201ENST00000363426 164 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL356057.1-202ENST00000402263 756 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL591848.1-201ENST00000413092 322 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RPL6P29-201ENST00000414863 865 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL358176.3-201ENST00000420757 454 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 FABP7P1-201ENST00000424004 391 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RPS6P2-201ENST00000454208 705 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RPS29P22-201ENST00000472363 168 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC007686.1-201ENST00000488511 463 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 MIR4270-201ENST00000581799 70 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC005520.3-201ENST00000602874 370 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AL136295.6-201ENST00000610486 658 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC116447.1-201ENST00000613153 453 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC025016.1-201ENST00000616746 682 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC015871.5-202ENST00000623252 701 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AP003497.2-201ENST00000624220 967 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 DDX18P4-201ENST00000511690 1966 ntBASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4BQ9Y4P1 ZFRP1-201ENST00000457579 2970 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC096656.1-201ENST00000623826 1364 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC000123.3-201ENST00000624029 4975 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL031119.1-201ENST00000404707 1879 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 RNVU1-6-201ENST00000364688 164 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 RNU6-185P-201ENST00000384421 107 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 UBE2V1P15-201ENST00000407776 448 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 BX510359.2-201ENST00000417920 305 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC048351.1-201ENST00000420064 602 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL450263.2-201ENST00000439400 589 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 H2AFZP5-201ENST00000446960 382 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL031584.1-201ENST00000447169 754 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC104651.2-201ENST00000447549 528 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 HMGB1P5-202ENST00000451497 985 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 CABYRP1-201ENST00000465493 1045 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 ARL4AP1-201ENST00000503220 705 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 RNU2-30P-201ENST00000516209 141 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 NOP56P3-201ENST00000549457 385 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 RN7SL652P-201ENST00000577769 300 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC005242.1-201ENST00000585658 438 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AC104785.1-201ENST00000603220 588 ntBASIC4.44□□□□□ -1.7
ATG4BQ9Y4P1 AL008729.2-201ENST00000606393 473 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms