Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VPS9D1Q9Y2B5 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AL161912.4-201ENST00000623889 2468 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC025125.1-201ENST00000624743 1922 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 HSPE1P11-201ENST00000339579 310 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU1-21P-201ENST00000363327 163 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-82P-201ENST00000363970 107 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-704P-201ENST00000364162 103 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 SNORA62.1-201ENST00000364287 154 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU1-122P-201ENST00000365538 156 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-744P-201ENST00000365557 107 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-1316P-201ENST00000384242 108 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 MT-TP-201ENST00000387461 68 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC004986.1-201ENST00000414855 607 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AL353662.1-201ENST00000439099 327 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 CHIAP1-201ENST00000456220 995 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC004801.2-202ENST00000463559 283 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC011005.3-201ENST00000491624 395 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 HIGD1AP13-201ENST00000509878 289 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-120P-201ENST00000516077 103 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC078899.1-201ENST00000521432 1185 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 OR7E87P-201ENST00000532397 929 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC128657.1-201ENST00000549459 145 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AL049839.1-201ENST00000556151 657 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RPL21P12-201ENST00000559810 515 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RN7SL14P-201ENST00000579715 298 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AL157899.1-201ENST00000604110 936 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 PFN1P2-202ENST00000621347 397 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RPL36AP21-202ENST00000639134 430 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 USP9YP4-201ENST00000424401 1745 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 RAD17P2-201ENST00000451754 1977 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 HSPA8P11-201ENST00000508840 1898 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 AL136984.1-201ENST00000607611 1893 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 SDAD1P2-201ENST00000441308 2028 ntBASIC7.51□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VPS9D1Q9Y2B5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms