Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 SNORA70F-201ENST00000384142 135 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AL049697.2-201ENST00000403708 294 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 E2F6P2-201ENST00000420708 748 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AL606490.7-201ENST00000433136 191 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RPS17P8-201ENST00000434525 335 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 MRPS33P4-201ENST00000434892 317 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 HMGB3P9-201ENST00000441799 583 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 MRPL48P1-201ENST00000445390 636 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AL031584.1-201ENST00000447169 754 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RHEBP2-201ENST00000450289 600 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RPL7AP52-201ENST00000458096 790 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 OR52A4P-201ENST00000472867 958 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RN7SL558P-201ENST00000497468 299 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC016550.3-201ENST00000515706 767 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RN7SKP46-201ENST00000515942 234 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RNU1-6P-201ENST00000516290 144 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC087477.6-201ENST00000559595 843 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 MIR4277-201ENST00000578298 84 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC090953.1-201ENST00000604305 1092 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 BX322635.1-201ENST00000605804 496 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC083809.1-201ENST00000615051 472 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RNU1-82P-201ENST00000390851 165 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RNU6-244P-201ENST00000391028 104 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 U3.35-201ENST00000408405 208 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 ATG4AP1-201ENST00000416893 538 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC009302.1-201ENST00000417147 390 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 LINC00993-201ENST00000420453 540 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 GSTA7P-201ENST00000438425 448 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AL354710.1-201ENST00000453641 246 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 CYCSP34-201ENST00000458172 304 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RPS23P7-201ENST00000466210 444 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC026979.1-201ENST00000492525 396 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC113430.1-201ENST00000506872 718 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AL110118.1-201ENST00000553543 400 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 RN7SL652P-201ENST00000577769 300 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA1Q9UND3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms