Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 MIMT1-201ENST00000597105 1050 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 RNU2-65P-201ENST00000410162 185 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 ATP5A1P2-201ENST00000412323 255 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC090136.1-201ENST00000520009 240 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC092376.2-201ENST00000622621 4116 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 PRNCR1-201ENST00000635449 12727 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AL592291.1-201ENST00000403830 352 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 CTSL3P-202ENST00000412179 788 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 RPL38P1-201ENST00000460914 211 ntBASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD7Q9P2D1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 VPS35P1-201ENST00000563400 1518 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 SOD2P1-201ENST00000396543 562 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 HSPD1P21-201ENST00000436541 245 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 RNA5SP497-201ENST00000516081 97 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 RN7SKP57-201ENST00000517248 293 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 MIR3922-201ENST00000585192 84 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 RNU1-33P-201ENST00000364249 162 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 MIR921-201ENST00000401133 56 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 OR4K6P-201ENST00000416478 897 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC024224.1-201ENST00000538284 609 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AL352979.3-201ENST00000553515 247 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC140113.4-201ENST00000622087 222 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AL731532.2-201ENST00000623542 1953 ntBASIC4.25□□□□□ -1.73
CHD7Q9P2D1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD7Q9P2D1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 EI24P3-201ENST00000399046 1062 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 GTF2IP8-201ENST00000560687 584 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 MIR4325-201ENST00000583049 90 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AC120036.2-201ENST00000509729 1474 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms