Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 GLULP6-201ENST00000399502 913 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 SNRPFP1-201ENST00000414761 252 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC019050.1-201ENST00000418508 492 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 UBTFL3-201ENST00000418934 1024 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 RPEP3-201ENST00000425462 676 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 UBE2D3P3-201ENST00000426992 425 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 FTH1P16-201ENST00000435241 552 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 UBTFL6-201ENST00000477929 1024 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 RPL21P6-201ENST00000479171 504 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 NPM1P29-201ENST00000483112 803 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC012123.2-201ENST00000485809 248 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 MTCO2P9-201ENST00000503214 694 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 OR5D2P-201ENST00000524390 911 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC006116.7-201ENST00000590141 756 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AP001160.4-201ENST00000596971 382 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC004775.1-201ENST00000607389 753 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC015922.4-201ENST00000612568 690 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AL133243.1-201ENST00000614487 366 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC023510.2-201ENST00000622162 746 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AP001784.1-201ENST00000624107 428 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AL049536.1-201ENST00000625043 744 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC093909.5-201ENST00000621839 1799 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 DHX40P1-201ENST00000588725 1412 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC092435.4-201ENST00000623012 4159 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 AC017002.4-201ENST00000604721 1525 ntBASIC4.77□□□□□ -1.65
SIX2Q9NPC8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC008033.1-201ENST00000216407 1162 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC079741.1-201ENST00000321498 212 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AL356968.2-201ENST00000412769 1257 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 UQCRBP1-201ENST00000421129 336 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 CENPIP1-201ENST00000425713 902 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC114495.1-201ENST00000441274 436 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 BUD31P2-201ENST00000449374 300 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC053481.1-201ENST00000467217 306 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC104629.2-201ENST00000468627 598 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 OR52A4P-201ENST00000472867 958 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 OR9N1P-202ENST00000494289 481 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC016550.3-201ENST00000515706 767 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 OR8G5-201ENST00000524943 1041 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC068339.2-201ENST00000534395 618 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC051619.2-201ENST00000559063 397 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC084783.1-201ENST00000565846 910 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 BNIP3P40-201ENST00000596017 556 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC018690.1-201ENST00000608144 626 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AL138721.1-201ENST00000616756 179 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms