Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CHIAP3-201ENST00000423668 1133 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 SEC63P1-201ENST00000425785 1258 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RPS26P4-201ENST00000431743 355 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC073052.1-201ENST00000440417 714 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 EIF2S2P2-201ENST00000447161 982 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC009963.2-201ENST00000453431 138 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC090686.1-201ENST00000481577 749 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 TCP11X3P-202ENST00000514289 1254 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RNU1-6P-201ENST00000516290 144 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 DYNLL1P4-201ENST00000549314 266 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AL049830.4-201ENST00000555149 351 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AP005119.2-201ENST00000579735 1105 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC068020.1-201ENST00000594215 661 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC130352.1-201ENST00000602979 661 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC097505.1-201ENST00000610199 565 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AL121873.1-201ENST00000616013 524 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 AL592148.3-201ENST00000608771 2646 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
TM9SF3Q9HD45 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC108751.5-201ENST00000492880 1336 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC068446.1-201ENST00000556425 1549 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 DDX18P4-201ENST00000511690 1966 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RNA5SP447-201ENST00000363749 119 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 ATP5F1P2-201ENST00000398143 760 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 QRSL1P2-201ENST00000418582 964 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 BTF3P9-201ENST00000418784 283 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC007064.3-201ENST00000422608 359 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL645608.4-201ENST00000423619 154 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RPEP3-201ENST00000425462 676 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 IPMKP1-201ENST00000425988 855 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL732292.1-201ENST00000426692 226 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RSL24D1P6-201ENST00000426934 401 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RPS17P8-201ENST00000434525 335 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC239809.1-201ENST00000450470 217 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC020890.1-201ENST00000491837 504 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RPS27AP16-201ENST00000492222 470 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 NDUFB4P12-201ENST00000513465 390 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC026688.1-201ENST00000520639 1168 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC005868.1-201ENST00000536421 331 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 MIR4716-201ENST00000579628 84 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC073091.2-201ENST00000603205 907 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AL590392.1-201ENST00000604960 446 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AP006248.2-201ENST00000623309 592 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 MIR6830-201ENST00000636015 70 ntBASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF3Q9HD45 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF3Q9HD45 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms