Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 AL139805.2-201ENST00000455305 2433 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 FANCD2P2-201ENST00000437591 1400 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC006058.1-201ENST00000568686 5067 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 MTND4P1-201ENST00000457501 1466 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL139276.1-201ENST00000311910 1001 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 HSPE1P11-201ENST00000339579 310 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 RNU6-784P-201ENST00000384330 106 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RNU4-70P-201ENST00000384579 139 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 PRRC2CP1-201ENST00000404428 159 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 RN7SKP235-201ENST00000410662 305 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RPS12P24-201ENST00000412619 387 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RPS29P14-201ENST00000431518 171 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL035666.1-201ENST00000446195 348 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 RPL35AP28-201ENST00000459730 331 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 RPL23P10-201ENST00000468780 412 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC104109.1-201ENST00000498563 436 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 TECRP2-201ENST00000503270 928 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 RNU6-1137P-201ENST00000517073 99 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 MYL12BP1-201ENST00000569826 507 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC011477.5-201ENST00000586571 259 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL512782.1-201ENST00000603093 364 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 CUX2P1-201ENST00000606426 298 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL022238.3-201ENST00000609279 443 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AP005329.3-201ENST00000609924 686 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AL157817.1-201ENST00000614264 790 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC129908.1-201ENST00000624553 648 ntBASIC7.44□□□□□ -1.22
PHOX2BQ99453 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.44□□□□□ -1.22
PHOX2BQ99453 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PHOX2BQ99453 Z99129.4-201ENST00000624649 2435 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PHOX2BQ99453 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.43□□□□□ -1.22
PHOX2BQ99453 RNU6-552P-201ENST00000362869 119 ntBASIC7.43□□□□□ -1.22
PHOX2BQ99453 SNORA70.5-201ENST00000365519 135 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms