Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC009127.1-201ENST00000467090 155 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 CYCSP20-201ENST00000473154 315 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL161747.1-201ENST00000480068 358 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 PPM1AP1-201ENST00000502740 1135 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC083829.1-201ENST00000503756 657 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC090568.1-201ENST00000509499 856 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AP000916.1-201ENST00000533869 835 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC092451.2-201ENST00000538746 658 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 RPSAP73-201ENST00000614820 330 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC140113.4-201ENST00000622087 222 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AP002505.2-201ENST00000623585 696 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AC012020.1-201ENST00000624541 1728 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RFT1Q96AA3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RFT1Q96AA3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RFT1Q96AA3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
RFT1Q96AA3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RFT1Q96AA3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 MTCO1P18-201ENST00000455518 1419 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 MTND4P31-201ENST00000425607 1343 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 RN7SKP113-201ENST00000363891 295 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 RNU1-43P-201ENST00000365052 165 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 SNORA70.10-201ENST00000384515 134 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 MIR195-201ENST00000385194 87 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL590290.1-201ENST00000405336 380 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 MIR1182-201ENST00000408363 97 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 RN7SKP293-201ENST00000411389 296 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC019050.1-201ENST00000418508 492 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 QRSL1P2-201ENST00000418582 964 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC108075.1-201ENST00000424692 529 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC093655.2-201ENST00000425735 631 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL512637.2-201ENST00000431287 1256 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 PPIAP13-201ENST00000434706 478 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 ARL5AP2-201ENST00000444698 533 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 RPL32P14-201ENST00000463196 378 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 RPS4XP18-201ENST00000495480 763 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC010285.3-201ENST00000511668 676 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 POLR2KP1-201ENST00000553226 168 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC090888.3-201ENST00000558917 509 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC090515.3-201ENST00000560431 315 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC090079.2-201ENST00000575289 768 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 ELOCP28-201ENST00000590044 317 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC026979.4-201ENST00000606555 645 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC120053.1-201ENST00000607706 736 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 FRG1HP-204ENST00000617940 757 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC005086.4-201ENST00000623065 213 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC116563.2-201ENST00000624751 535 ntBASIC4.33□□□□□ -1.72
RFT1Q96AA3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms