Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 MFSD8-220ENST00000641243 1422 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC114947.2-201ENST00000565748 2125 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 MIR525-201ENST00000384978 85 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 RNU6-77P-201ENST00000410554 91 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 RBMY2KP-201ENST00000418221 992 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC093655.2-201ENST00000425735 631 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC091959.2-201ENST00000477363 321 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 CDH12P4-201ENST00000517835 295 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 CDH12P3-201ENST00000517935 295 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 CDH12P1-201ENST00000518435 295 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC010306.1-201ENST00000523223 1117 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 OR7E128P-201ENST00000532736 1024 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 NMNAT1P5-201ENST00000559657 841 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 CLIC4P2-201ENST00000601934 717 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC022022.2-201ENST00000602989 360 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC006363.1-201ENST00000603806 463 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC087683.2-201ENST00000611384 326 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AL049539.1-201ENST00000611964 459 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 FRG1EP-201ENST00000634469 770 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 LINC01739-205ENST00000641890 573 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC33Q8N5R6 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 Y_RNA.472-201ENST00000384322 102 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 SNORD116-12-201ENST00000384468 92 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RN7SKP126-201ENST00000411143 300 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 HIGD1AP15-201ENST00000416198 280 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RPS3AP37-201ENST00000419176 745 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC092447.3-201ENST00000426027 686 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RPS11P7-201ENST00000442125 465 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 TCEA1P3-201ENST00000443005 880 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 Z73417.1-201ENST00000447373 778 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RPS6P2-201ENST00000454208 705 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 snoZ278.1-201ENST00000517059 112 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 IGJP1-201ENST00000522682 475 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 MTCO3P15-201ENST00000526563 574 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 RN7SL290P-201ENST00000578661 300 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 OR1S1-201ENST00000624470 978 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AC138393.1-206ENST00000540997 1886 ntBASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC33Q8N5R6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC33Q8N5R6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC33Q8N5R6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms