Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC023141.6-201ENST00000429418 337 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC011998.1-201ENST00000433403 117 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 GSTA7P-201ENST00000438425 448 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC007016.1-201ENST00000512110 244 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 RN7SKP122-201ENST00000515923 296 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 MTND6P33-201ENST00000571794 183 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC092653.1-201ENST00000608509 531 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
RAB43Q86YS6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.34□□□□□ -1.72
RAB43Q86YS6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RAB43Q86YS6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RAB43Q86YS6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 RNU4-39P-201ENST00000362455 127 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 RNU4-25P-201ENST00000410569 230 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AL592293.2-201ENST00000422292 996 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 FGF7P3-201ENST00000454645 303 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 RPS26P28-201ENST00000470806 348 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC083829.1-201ENST00000503756 657 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 AP001960.1-201ENST00000506494 658 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC105129.1-201ENST00000560250 297 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 AC133552.5-201ENST00000604266 540 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 COX6CP4-201ENST00000605798 228 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 MIR6830-201ENST00000636015 70 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAB43Q86YS6 RAD17P1-201ENST00000418130 2042 ntBASIC4.33□□□□□ -1.72
RAB43Q86YS6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.33□□□□□ -1.72
RAB43Q86YS6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 OR52B1P-201ENST00000316506 909 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 RN7SKP227-201ENST00000364445 330 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 RNU6-1320P-201ENST00000390838 107 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 RNU6-1269P-201ENST00000391139 107 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 SNORA68.2-201ENST00000391263 128 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC096644.3-201ENST00000416788 338 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 CHIAP3-201ENST00000423668 1133 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAB43Q86YS6 MTCO1P51-201ENST00000427672 1060 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 AL138787.1-202ENST00000437804 898 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 YWHAZP2-201ENST00000440317 728 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 RNU6-599P-201ENST00000459383 107 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 RNU6-1193P-201ENST00000459461 107 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC109327.1-201ENST00000471666 403 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC138701.1-201ENST00000524329 714 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
RAB43Q86YS6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.32□□□□□ -1.72
RAB43Q86YS6 SS18L2P2-201ENST00000583960 235 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms