Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC098799.3-201ENST00000506095 438 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 HNRNPCP4-201ENST00000571636 900 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 HMGB2P1-201ENST00000591146 634 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC073091.2-201ENST00000603205 907 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC140113.4-201ENST00000622087 222 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AC004232.3-201ENST00000622977 525 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 AL359757.1-201ENST00000623176 255 ntBASIC4.28□□□□□ -1.72
RTL4Q6ZR62 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RTL4Q6ZR62 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 OR51B3P-201ENST00000412287 913 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 FAR2P2-201ENST00000413041 594 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 PDSS1P1-201ENST00000422953 1114 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 FAR2P4-202ENST00000425399 584 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CNOT7P1-201ENST00000429006 852 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC068287.1-201ENST00000430283 295 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 NFYAP1-201ENST00000431953 972 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC069285.2-201ENST00000440210 275 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 OR52Y1P-201ENST00000452418 828 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 snoU13.1-201ENST00000459157 104 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 RWDD4P1-201ENST00000488019 565 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 MTND4LP2-201ENST00000502312 285 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AK3P4-201ENST00000504283 583 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 MYL12AP1-201ENST00000518490 515 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 RAB9BP1-201ENST00000519581 626 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC105129.1-201ENST00000560250 297 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC069061.3-201ENST00000582254 823 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC020915.5-201ENST00000596836 964 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC093765.1-201ENST00000603758 881 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AL713998.2-201ENST00000604538 1198 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC026368.1-201ENST00000614934 690 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC005086.4-201ENST00000623065 213 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 MIR7641-1-201ENST00000627518 61 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AC090017.1-201ENST00000548612 1779 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 MFSD8-242ENST00000641690 4199 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.27□□□□□ -1.73
RTL4Q6ZR62 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AL592148.3-201ENST00000608771 2646 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AL031119.1-201ENST00000404707 1879 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AC233968.1-201ENST00000611212 1300 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 OR11H5P-202ENST00000641612 1325 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AL132640.2-201ENST00000559968 1698 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTL4Q6ZR62 RNU1-20P-201ENST00000363314 162 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AL450992.3-201ENST00000413192 568 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 AC099336.2-201ENST00000422457 254 ntBASIC4.26□□□□□ -1.73
RTL4Q6ZR62 CENPIP1-201ENST00000425713 902 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms