Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.96□□□□□ -1.77
H3F3AP84243 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
H3F3AP84243 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
H3F3AP84243 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
H3F3AP84243 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
H3F3AP84243 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
H3F3AP84243 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 RNU1-20P-201ENST00000363314 162 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 RPL5P19-201ENST00000404228 893 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AL078604.1-201ENST00000404609 466 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
H3F3AP84243 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.96□□□□□ -1.78
H3F3AP84243 TMSB10P2-201ENST00000416049 131 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 CENPIP1-201ENST00000425713 902 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AP000936.3-201ENST00000438127 255 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 UBE2V1P3-201ENST00000439651 417 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC022431.1-201ENST00000450941 438 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC243772.1-201ENST00000451620 410 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AL121877.1-201ENST00000453704 622 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 MTND6P32-201ENST00000457611 483 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC093720.1-201ENST00000505681 714 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.96□□□□□ -1.78
H3F3AP84243 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
H3F3AP84243 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 PDCD5P1-201ENST00000543528 309 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 CR383656.6-201ENST00000550518 394 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AL121839.1-201ENST00000556233 1185 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC090312.1-201ENST00000580637 348 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 MIR5096-201ENST00000583713 70 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.96□□□□□ -1.78
H3F3AP84243 AC091979.2-201ENST00000607514 214 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 MIR6820-201ENST00000611508 62 ntBASIC3.96□□□□□ -1.78
H3F3AP84243 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
H3F3AP84243 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.96□□□□□ -1.78
H3F3AP84243 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.78
H3F3AP84243 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
H3F3AP84243 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
H3F3AP84243 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.95□□□□□ -1.78
H3F3AP84243 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
H3F3AP84243 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
H3F3AP84243 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 AC105074.1-201ENST00000623380 3095 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 AC017104.4-201ENST00000636283 1592 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 OR5P1P-201ENST00000299512 925 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 RNU1-44P-201ENST00000384453 163 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 RN7SKP167-201ENST00000411047 285 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 EIF4A1P3-201ENST00000411521 244 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 FTH1P16-201ENST00000435241 552 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 TXNP2-201ENST00000443918 295 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 snoU13.1-201ENST00000459157 104 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 RPS27AP17-201ENST00000463344 455 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 RPL21P126-201ENST00000470049 478 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC021483.2-201ENST00000567415 758 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 AC008759.1-201ENST00000589783 983 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.95□□□□□ -1.78
H3F3AP84243 AL035461.2-201ENST00000619201 524 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 AC067931.1-201ENST00000624190 671 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.95□□□□□ -1.78
H3F3AP84243 NOL8P1-201ENST00000508336 3529 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
H3F3AP84243 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.95□□□□□ -1.78
H3F3AP84243 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
H3F3AP84243 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms