Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 RNA5SP305-201ENST00000362665 119 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 RNU6-236P-201ENST00000363886 106 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 RNU4-4P-201ENST00000364588 130 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 SNORD65C-201ENST00000390962 71 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 RPL7P27-201ENST00000403775 720 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 RNA5SP296-201ENST00000410523 111 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 FTH1P16-201ENST00000435241 552 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 AC092647.3-201ENST00000443044 633 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 CEACAMP7-201ENST00000444105 496 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 HMGN2P25-201ENST00000486956 268 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN20P56880 NDUFA5P12-201ENST00000503796 343 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 RN7SKP147-201ENST00000517154 244 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 MORF4L1P3-201ENST00000525966 950 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN20P56880 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 ATP5F1P7-201ENST00000567330 760 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 MIR4675-201ENST00000577898 77 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN20P56880 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 BNIP3P38-201ENST00000601117 544 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AP005432.2-201ENST00000608162 586 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN20P56880 AC090510.2-201ENST00000617465 629 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AL078595.3-201ENST00000623815 1166 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN20P56880 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN20P56880 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CLDN20P56880 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN20P56880 AL034370.1-201ENST00000397254 1590 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CLDN20P56880 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN20P56880 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN20P56880 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 SEC63P2-201ENST00000503863 1939 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AC026523.2-201ENST00000625039 7739 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CLDN20P56880 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 THAP12P4-201ENST00000528321 2266 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN20P56880 SNORA58B-201ENST00000364259 136 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 SNORA62.2-201ENST00000364672 152 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 RNA5SP455-201ENST00000365190 119 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 RNU6-225P-201ENST00000384613 103 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 LINC01881-201ENST00000416103 412 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 DDX39BP1-205ENST00000422507 192 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 PSMD10P3-201ENST00000437000 448 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 AP000936.3-201ENST00000438127 255 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 OR51B8P-201ENST00000449892 769 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AL445433.1-201ENST00000457507 257 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 RN7SL329P-201ENST00000467740 299 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AC022795.1-201ENST00000473808 480 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AC020898.1-201ENST00000474167 787 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AC104687.1-201ENST00000485829 412 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN20P56880 AC111193.1-201ENST00000504097 155 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN20P56880 HPRT1P1-201ENST00000509498 657 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 AC110775.1-201ENST00000513721 462 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 RNU6-1028P-201ENST00000517164 93 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
CLDN20P56880 IGKV2D-10-201ENST00000520194 281 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms