Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC113398.2-201ENST00000507630 558 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 PARP4P3-201ENST00000510265 317 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN6P56747 MTND4LP31-201ENST00000514859 294 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 RNA5SP303-201ENST00000516192 130 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 SNORA67.7-201ENST00000516664 135 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 Y_RNA.719-201ENST00000517156 106 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN6P56747 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 TRAV8-5-201ENST00000537369 341 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
CLDN6P56747 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN6P56747 AL049830.4-201ENST00000555149 351 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 FAM106CP-201ENST00000582212 507 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC099676.1-201ENST00000608886 657 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC015871.5-202ENST00000623252 701 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 AP003499.2-201ENST00000624100 483 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 MIR3653-201ENST00000625572 110 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 OR8B1P-202ENST00000641132 1178 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CLDN6P56747 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN6P56747 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN6P56747 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN6P56747 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN6P56747 AL391684.1-202ENST00000641293 1636 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AP000756.2-201ENST00000624168 2567 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC126323.6-202ENST00000568092 3511 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 Y_RNA.62-201ENST00000362840 99 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 AL022722.2-201ENST00000402519 180 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 Z98745.1-201ENST00000402553 494 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 RNU6-628P-201ENST00000410675 107 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 NRBF2P2-201ENST00000413087 861 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 RPL36AP10-201ENST00000421785 322 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 RPL23AP38-201ENST00000423801 469 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 MTCYBP14-201ENST00000457471 715 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AL591473.1-201ENST00000464297 313 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 RNA5SP249-201ENST00000516127 99 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN6P56747 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 OR8R1P-201ENST00000543943 764 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 AL390334.1-201ENST00000556395 450 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC087477.6-201ENST00000559595 843 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC053481.3-201ENST00000577881 843 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AP001160.4-201ENST00000596971 382 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 AL139254.3-201ENST00000641097 674 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 LINC01808-202ENST00000641680 1116 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN6P56747 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN6P56747 AC107068.1-201ENST00000563286 4218 ntBASIC4.36□□□□□ -1.71
CLDN6P56747 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN6P56747 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN6P56747 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN6P56747 AC139713.2-215ENST00000641428 5037 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN6P56747 SCN1A-220ENST00000641603 12506 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN6P56747 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 MIR383-201ENST00000362257 73 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 RNA5SP366-201ENST00000365454 123 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN6P56747 UBBP2-201ENST00000376781 231 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 RNA5SP105-201ENST00000391123 113 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AL359643.1-201ENST00000404109 423 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AL445189.1-201ENST00000405722 338 ntBASIC4.35□□□□□ -1.71
CLDN6P56747 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN6P56747 HSPE1P16-201ENST00000426640 348 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms