Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PHKBP1-201ENST00000450951 1951 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SUMO3P55854 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SUMO3P55854 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 AC016716.1-201ENST00000265882 708 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RNA5SP326-201ENST00000363209 110 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SUMO3P55854 MIR551A-201ENST00000385042 96 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 U3.23-201ENST00000391132 200 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 AL121978.1-201ENST00000402778 359 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 AC079807.1-201ENST00000429993 481 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RPS29P14-201ENST00000431518 171 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC005345.1-201ENST00000431868 217 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AL513185.3-201ENST00000433335 1300 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC006484.1-201ENST00000435086 1884 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC073109.1-201ENST00000445066 978 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RSL24D1P3-201ENST00000449255 495 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 NDUFA5P7-201ENST00000452914 242 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AL358876.1-201ENST00000453364 1075 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 HMGN3P1-201ENST00000453847 193 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 RPS15AP1-201ENST00000457423 391 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 UBFD1P1-201ENST00000473259 814 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RPS3AP43-201ENST00000479743 781 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 MTCO1P30-201ENST00000515244 580 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RNU6-202P-201ENST00000515998 96 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RNU6-232P-201ENST00000517144 64 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 RNU6-1261P-201ENST00000517194 104 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 SNORA43.3-201ENST00000517240 103 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC123769.1-201ENST00000530992 3192 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC135279.1-201ENST00000543493 504 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC135628.1-201ENST00000568867 534 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.1□□□□□ -1.59
SUMO3P55854 AC103881.1-201ENST00000603476 538 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 AC009090.3-201ENST00000616553 565 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AP001005.3-201ENST00000622049 129 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 AC091305.2-201ENST00000624049 1576 ntBASIC5.1□□□□□ -1.59
SUMO3P55854 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SUMO3P55854 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SUMO3P55854 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SUMO3P55854 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SUMO3P55854 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.09□□□□□ -1.59
SUMO3P55854 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SUMO3P55854 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.09□□□□□ -1.59
SUMO3P55854 AC004076.2-201ENST00000620532 3323 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 AL034370.1-201ENST00000397254 1590 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SUMO3P55854 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SUMO3P55854 SRRM1P3-201ENST00000426911 2678 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 AC092681.1-201ENST00000297369 291 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 RNU4-4P-201ENST00000364588 130 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 RN7SKP15-201ENST00000364742 309 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SUMO3P55854 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 RNA5SP122-201ENST00000384457 108 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 MTCO3P31-201ENST00000405526 789 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.09□□□□□ -1.59
SUMO3P55854 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 SETP15-201ENST00000412724 337 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 AL136133.1-201ENST00000413694 376 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.09□□□□□ -1.59
SUMO3P55854 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.09□□□□□ -1.59
SUMO3P55854 AC009237.2-201ENST00000421358 284 ntBASIC5.09□□□□□ -1.59
SUMO3P55854 AKR1B10P1-201ENST00000425765 942 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms