Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RPL7AP25-201ENST00000423357 805 ntBASIC4.25□□□□□ -1.73
LIM2P55344 CR848007.2-201ENST00000424918 787 ntBASIC4.25□□□□□ -1.73
LIM2P55344 RPL23AP1-201ENST00000428990 471 ntBASIC4.25□□□□□ -1.73
LIM2P55344 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 RPL23AP25-201ENST00000430973 463 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC093716.1-201ENST00000435923 377 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.25□□□□□ -1.73
LIM2P55344 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 AL627224.1-201ENST00000448334 444 ntBASIC4.25□□□□□ -1.73
LIM2P55344 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 TPRKBP1-201ENST00000456243 481 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 RPL23AP65-201ENST00000475608 468 ntBASIC4.25□□□□□ -1.73
LIM2P55344 RN7SL205P-201ENST00000490174 284 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
LIM2P55344 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 AK3P4-201ENST00000504283 583 ntBASIC4.25□□□□□ -1.73
LIM2P55344 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 FABP5P6-201ENST00000510588 409 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 RPS27AP18-201ENST00000515536 459 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.25□□□□□ -1.73
LIM2P55344 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LIM2P55344 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.25□□□□□ -1.73
LIM2P55344 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 CD24P2-201ENST00000565486 219 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AP005119.2-201ENST00000579735 1105 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
LIM2P55344 AC234771.5-201ENST00000600161 514 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC084373.1-201ENST00000603311 235 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC093765.1-201ENST00000603758 881 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.25□□□□□ -1.73
LIM2P55344 AL121890.2-201ENST00000617644 465 ntBASIC4.25□□□□□ -1.73
LIM2P55344 RN7SL722P-201ENST00000617780 284 ntBASIC4.25□□□□□ -1.73
LIM2P55344 RN7SL565P-201ENST00000618246 284 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AP005019.3-201ENST00000620418 560 ntBASIC4.25□□□□□ -1.73
LIM2P55344 LINC00216-201ENST00000623548 1126 ntBASIC4.25□□□□□ -1.73
LIM2P55344 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.25□□□□□ -1.73
LIM2P55344 OR56B2P-202ENST00000641377 2453 ntBASIC4.25□□□□□ -1.73
LIM2P55344 OR51H2P-202ENST00000641424 3046 ntBASIC4.25□□□□□ -1.73
LIM2P55344 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LIM2P55344 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIM2P55344 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LIM2P55344 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.25□□□□□ -1.73
LIM2P55344 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
LIM2P55344 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIM2P55344 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
LIM2P55344 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 MIR421-201ENST00000365696 85 ntBASIC4.24□□□□□ -1.73
LIM2P55344 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LIM2P55344 RNU1-63P-201ENST00000383902 164 ntBASIC4.24□□□□□ -1.73
LIM2P55344 MIR129-1-201ENST00000384972 72 ntBASIC4.24□□□□□ -1.73
LIM2P55344 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LIM2P55344 RNA5SP146-201ENST00000410743 123 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC002524.1-201ENST00000411687 547 ntBASIC4.24□□□□□ -1.73
LIM2P55344 RPL26P29-201ENST00000415623 438 ntBASIC4.24□□□□□ -1.73
LIM2P55344 OR6K4P-201ENST00000423179 955 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 NPM1P33-201ENST00000438918 872 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC245517.2-201ENST00000442890 346 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AL513343.1-201ENST00000451818 792 ntBASIC4.24□□□□□ -1.73
LIM2P55344 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 NDUFA12P1-201ENST00000455914 406 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 RN7SL41P-201ENST00000476144 297 ntBASIC4.24□□□□□ -1.73
LIM2P55344 RPL21P6-201ENST00000479171 504 ntBASIC4.24□□□□□ -1.73
LIM2P55344 HMGB1P47-201ENST00000511281 589 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.24□□□□□ -1.73
LIM2P55344 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.24□□□□□ -1.73
LIM2P55344 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.24□□□□□ -1.73
LIM2P55344 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIM2P55344 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
LIM2P55344 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.24□□□□□ -1.73
LIM2P55344 AC104785.1-201ENST00000603220 588 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AL133247.2-201ENST00000603236 482 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC115286.1-201ENST00000604298 434 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AP002360.3-201ENST00000607673 710 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC020634.1-201ENST00000608701 549 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AL162233.1-201ENST00000620014 944 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 AP000346.3-201ENST00000622821 210 ntBASIC4.24□□□□□ -1.73
LIM2P55344 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.24□□□□□ -1.73
LIM2P55344 AC017002.4-201ENST00000604721 1525 ntBASIC4.24□□□□□ -1.73
LIM2P55344 AC120338.1-201ENST00000625074 1541 ntBASIC4.24□□□□□ -1.73
LIM2P55344 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LIM2P55344 AC093849.1-201ENST00000563631 2209 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms