Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
HMGCS2P54868 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGCS2P54868 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGCS2P54868 PEX12P1-201ENST00000400284 1048 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 VTI1BP4-201ENST00000427516 527 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGCS2P54868 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 RPL21P89-201ENST00000444021 467 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 RPL5P32-201ENST00000454085 879 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 OR7L1P-201ENST00000456181 380 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 RN7SL132P-201ENST00000478131 296 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGCS2P54868 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCS2P54868 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCS2P54868 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCS2P54868 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 AL160290.3-201ENST00000604869 165 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 COX6CP4-201ENST00000605798 228 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 FAM27D1-201ENST00000612308 341 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 MIR6875-201ENST00000617506 72 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 FP325313.1-201ENST00000638228 703 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 AC017104.4-201ENST00000636283 1592 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 AC027228.2-201ENST00000567141 2154 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS2P54868 VPS35P1-201ENST00000563400 1518 ntBASIC5.02□□□□□ -1.61
HMGCS2P54868 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS2P54868 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HMGCS2P54868 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGCS2P54868 CYP1D1P-201ENST00000416662 1433 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGCS2P54868 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HMGCS2P54868 RNA5SP513-201ENST00000364648 118 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 RNA5SP151-201ENST00000365632 117 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 ATP5F1P3-201ENST00000397213 657 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 RPL21P65-201ENST00000406094 466 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 RN7SKP202-201ENST00000410439 330 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGCS2P54868 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGCS2P54868 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGCS2P54868 AC034236.1-201ENST00000469891 373 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HMGCS2P54868 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGCS2P54868 HMGB3P16-201ENST00000508037 287 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AL592156.1-201ENST00000508758 304 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AC099522.1-202ENST00000514718 367 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 SNORA67.7-201ENST00000516664 135 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 RNU1-45P-201ENST00000517191 141 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.01□□□□□ -1.61
HMGCS2P54868 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGCS2P54868 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.01□□□□□ -1.61
HMGCS2P54868 AC234775.3-201ENST00000564612 656 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 MIR4286-201ENST00000580651 93 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGCS2P54868 MIR4660-201ENST00000583549 74 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AC008966.2-201ENST00000606157 453 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 RNU4-89P-201ENST00000607443 133 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AC096586.2-201ENST00000610260 441 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 AC006133.1-201ENST00000617106 264 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGCS2P54868 AC091905.2-201ENST00000623143 306 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 RLIMP1-201ENST00000339626 1680 ntBASIC5.01□□□□□ -1.61
HMGCS2P54868 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGCS2P54868 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HMGCS2P54868 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGCS2P54868 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
HMGCS2P54868 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGCS2P54868 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HMGCS2P54868 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HMGCS2P54868 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGCS2P54868 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGCS2P54868 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HMGCS2P54868 NAP1L4P1-201ENST00000319092 1157 ntBASIC5□□□□□ -1.61
HMGCS2P54868 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGCS2P54868 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5□□□□□ -1.61
HMGCS2P54868 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5□□□□□ -1.61
HMGCS2P54868 RPL7P2-201ENST00000427639 268 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms