Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP98P52948 AC097505.1-201ENST00000610199 565 ntBASIC5.17□□□□□ -1.58
NUP98P52948 AC015922.4-201ENST00000612568 690 ntBASIC5.17□□□□□ -1.58
NUP98P52948 AC099669.2-201ENST00000616549 437 ntBASIC5.17□□□□□ -1.58
NUP98P52948 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP98P52948 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP98P52948 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP98P52948 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
NUP98P52948 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP98P52948 HMGB3P19-201ENST00000403971 560 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RN7SKP156-201ENST00000410308 342 ntBASIC5.16□□□□□ -1.58
NUP98P52948 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP98P52948 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP98P52948 AC110792.1-201ENST00000491826 472 ntBASIC5.16□□□□□ -1.58
NUP98P52948 AC138938.1-201ENST00000515431 782 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RN7SKP141-201ENST00000516167 338 ntBASIC5.16□□□□□ -1.58
NUP98P52948 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP98P52948 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP98P52948 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP98P52948 AC053481.3-201ENST00000577881 843 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
NUP98P52948 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP98P52948 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP98P52948 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
NUP98P52948 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP98P52948 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP98P52948 SNORD46.1-201ENST00000364139 104 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RNA5SP513-201ENST00000364648 118 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP98P52948 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUP98P52948 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP98P52948 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP98P52948 RPL7P1-201ENST00000468161 747 ntBASIC5.16□□□□□ -1.58
NUP98P52948 RPL7P9-201ENST00000468715 747 ntBASIC5.16□□□□□ -1.58
NUP98P52948 DEFB109F-201ENST00000491870 277 ntBASIC5.16□□□□□ -1.58
NUP98P52948 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP98P52948 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP98P52948 AL049840.6-202ENST00000603373 279 ntBASIC5.16□□□□□ -1.58
NUP98P52948 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
NUP98P52948 AL138721.1-201ENST00000616756 179 ntBASIC5.16□□□□□ -1.58
NUP98P52948 AC097634.1-201ENST00000604491 2467 ntBASIC5.15□□□□□ -1.58
NUP98P52948 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUP98P52948 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
NUP98P52948 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
NUP98P52948 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUP98P52948 AL929601.4-201ENST00000613011 1341 ntBASIC5.15□□□□□ -1.59
NUP98P52948 OR4A15-201ENST00000314706 1035 ntBASIC5.15□□□□□ -1.59
NUP98P52948 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
NUP98P52948 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP98P52948 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP98P52948 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP98P52948 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP98P52948 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP98P52948 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP98P52948 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP98P52948 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
NUP98P52948 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP98P52948 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP98P52948 AC067945.1-201ENST00000342609 618 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AL607077.1-201ENST00000401718 499 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AC093578.1-201ENST00000415219 368 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP98P52948 RPL6P5-201ENST00000445678 828 ntBASIC5.14□□□□□ -1.59
NUP98P52948 FCF1P7-201ENST00000451185 558 ntBASIC5.14□□□□□ -1.59
NUP98P52948 EIF2S2P5-201ENST00000457635 968 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AC091564.1-201ENST00000464563 479 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AC010460.1-201ENST00000507087 466 ntBASIC5.14□□□□□ -1.59
NUP98P52948 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP98P52948 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP98P52948 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 SNORA67.7-201ENST00000516664 135 ntBASIC5.14□□□□□ -1.59
NUP98P52948 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP98P52948 MIR7702-201ENST00000621931 59 ntBASIC5.14□□□□□ -1.59
NUP98P52948 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP98P52948 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP98P52948 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP98P52948 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP98P52948 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP98P52948 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP98P52948 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP98P52948 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP98P52948 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms