Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 MTCO1P51-201ENST00000427672 1060 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC114973.1-201ENST00000429057 632 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AL512661.1-201ENST00000434586 1253 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 IGLVIV-65-201ENST00000517313 360 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 AC104115.2-201ENST00000523026 687 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.95□□□□□ -1.46
COL15A1P39059 AL121839.1-201ENST00000556233 1185 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.95□□□□□ -1.46
COL15A1P39059 MTCO3P22-201ENST00000603219 784 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC073137.1-201ENST00000605636 634 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC090948.1-201ENST00000607464 549 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.95□□□□□ -1.46
COL15A1P39059 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.95□□□□□ -1.46
COL15A1P39059 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.95□□□□□ -1.46
COL15A1P39059 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL15A1P39059 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
COL15A1P39059 AL731566.1-201ENST00000620490 1937 ntBASIC5.95□□□□□ -1.46
COL15A1P39059 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.94□□□□□ -1.46
COL15A1P39059 UGT2B26P-201ENST00000508672 1613 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 RNU6-584P-201ENST00000410350 95 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 RN7SKP263-201ENST00000411194 309 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.94□□□□□ -1.46
COL15A1P39059 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.94□□□□□ -1.46
COL15A1P39059 AL034379.1-201ENST00000423216 253 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 CKS1BP6-201ENST00000424932 240 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.94□□□□□ -1.46
COL15A1P39059 TCEA1P3-201ENST00000443005 880 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.94□□□□□ -1.46
COL15A1P39059 AC093166.2-201ENST00000455969 1017 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 RPL32P14-201ENST00000463196 378 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 RPL21P126-201ENST00000470049 478 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC025164.1-201ENST00000496249 478 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.94□□□□□ -1.46
COL15A1P39059 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.94□□□□□ -1.46
COL15A1P39059 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.94□□□□□ -1.46
COL15A1P39059 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.94□□□□□ -1.46
COL15A1P39059 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.94□□□□□ -1.46
COL15A1P39059 AC084824.1-201ENST00000550917 1005 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 GLRXP2-201ENST00000555594 321 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.94□□□□□ -1.46
COL15A1P39059 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL15A1P39059 MIR3138-201ENST00000585238 82 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC026741.1-201ENST00000605892 482 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC018754.1-201ENST00000607486 925 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AL592494.3-201ENST00000609485 464 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AL035461.2-201ENST00000619201 524 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 AC097520.1-201ENST00000624435 385 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.94□□□□□ -1.46
COL15A1P39059 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL15A1P39059 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.94□□□□□ -1.46
COL15A1P39059 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL15A1P39059 AP000756.2-201ENST00000624168 2567 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL15A1P39059 AC011503.2-201ENST00000594230 1500 ntBASIC5.94□□□□□ -1.46
COL15A1P39059 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL15A1P39059 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL15A1P39059 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL15A1P39059 AC021146.4-201ENST00000309229 279 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 AC017079.1-201ENST00000333650 415 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 RNA5SP28-201ENST00000363841 119 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL15A1P39059 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.93□□□□□ -1.46
COL15A1P39059 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.93□□□□□ -1.46
COL15A1P39059 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL15A1P39059 AC239367.2-201ENST00000447309 705 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.93□□□□□ -1.46
COL15A1P39059 CYCSP34-201ENST00000458172 304 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC104763.1-201ENST00000475274 360 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.93□□□□□ -1.46
COL15A1P39059 RNU5A-7P-201ENST00000515979 116 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.93□□□□□ -1.46
COL15A1P39059 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.93□□□□□ -1.46
COL15A1P39059 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.93□□□□□ -1.46
COL15A1P39059 AC013437.2-201ENST00000639587 677 ntBASIC5.93□□□□□ -1.46
COL15A1P39059 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL15A1P39059 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL15A1P39059 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms