Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.71□□□□□ -1.34
CLIP1P30622 SKP1P3-201ENST00000429280 487 ntBASIC6.71□□□□□ -1.34
CLIP1P30622 RPL5P32-201ENST00000454085 879 ntBASIC6.71□□□□□ -1.34
CLIP1P30622 RPS29P19-201ENST00000479709 171 ntBASIC6.71□□□□□ -1.34
CLIP1P30622 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.71□□□□□ -1.34
CLIP1P30622 SLC25A36P1-201ENST00000590111 465 ntBASIC6.71□□□□□ -1.34
CLIP1P30622 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP1P30622 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP1P30622 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CLIP1P30622 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
CLIP1P30622 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 VPS35P1-201ENST00000563400 1518 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CLIP1P30622 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 RNA5SP513-201ENST00000364648 118 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 MIR554-201ENST00000384874 96 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.7□□□□□ -1.34
CLIP1P30622 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.7□□□□□ -1.34
CLIP1P30622 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.7□□□□□ -1.34
CLIP1P30622 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.7□□□□□ -1.34
CLIP1P30622 AC112484.5-201ENST00000624189 228 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 CDRT1-208ENST00000630868 794 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
CLIP1P30622 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 AC017104.4-201ENST00000636283 1592 ntBASIC6.7□□□□□ -1.34
CLIP1P30622 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP1P30622 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CLIP1P30622 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP1P30622 SEPT7P8-201ENST00000413308 775 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP1P30622 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.69□□□□□ -1.34
CLIP1P30622 AL162151.2-201ENST00000448875 158 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 AC079804.1-201ENST00000461922 436 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 AC100770.1-201ENST00000532310 322 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP1P30622 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP1P30622 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP1P30622 AL138721.1-201ENST00000616756 179 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP1P30622 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP1P30622 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP1P30622 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
CLIP1P30622 AC116667.1-201ENST00000604855 2072 ntBASIC6.69□□□□□ -1.34
CLIP1P30622 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 RPL23AP46-201ENST00000438548 490 ntBASIC6.68□□□□□ -1.34
CLIP1P30622 ARAFP2-201ENST00000440565 559 ntBASIC6.68□□□□□ -1.34
CLIP1P30622 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.68□□□□□ -1.34
CLIP1P30622 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP1P30622 RNU1-45P-201ENST00000517191 141 ntBASIC6.68□□□□□ -1.34
CLIP1P30622 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.68□□□□□ -1.34
CLIP1P30622 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP1P30622 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP1P30622 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CLIP1P30622 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CLIP1P30622 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CLIP1P30622 AC010300.1-201ENST00000600671 5134 ntBASIC6.68□□□□□ -1.34
CLIP1P30622 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP1P30622 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.67□□□□□ -1.34
CLIP1P30622 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP1P30622 PRELID3BP10-201ENST00000431957 584 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.67□□□□□ -1.34
CLIP1P30622 DYNLL1P4-201ENST00000549314 266 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 AC027176.2-201ENST00000559166 746 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP1P30622 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP1P30622 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CLIP1P30622 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.67□□□□□ -1.34
CLIP1P30622 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP1P30622 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CLIP1P30622 ENSAP1-201ENST00000392855 326 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms