Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 AL160004.2-201ENST00000432935 350 ntBASIC7.08□□□□□ -1.28
VARSP26640 ERLEC1P1-201ENST00000433806 578 ntBASIC7.08□□□□□ -1.28
VARSP26640 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.08□□□□□ -1.28
VARSP26640 GTF2F2P2-201ENST00000445825 721 ntBASIC7.08□□□□□ -1.28
VARSP26640 HMGB3P22-202ENST00000451823 572 ntBASIC7.08□□□□□ -1.28
VARSP26640 PRPF38AP1-201ENST00000451976 933 ntBASIC7.08□□□□□ -1.28
VARSP26640 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VARSP26640 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 AC040975.1-201ENST00000472104 316 ntBASIC7.08□□□□□ -1.28
VARSP26640 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 RPS4XP18-201ENST00000495480 763 ntBASIC7.08□□□□□ -1.28
VARSP26640 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 RNU6-764P-201ENST00000516396 105 ntBASIC7.08□□□□□ -1.28
VARSP26640 RNU6-388P-201ENST00000517012 105 ntBASIC7.08□□□□□ -1.28
VARSP26640 RNU6-389P-201ENST00000517048 105 ntBASIC7.08□□□□□ -1.28
VARSP26640 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.08□□□□□ -1.28
VARSP26640 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.08□□□□□ -1.28
VARSP26640 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.08□□□□□ -1.28
VARSP26640 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 AL389895.1-201ENST00000554127 252 ntBASIC7.08□□□□□ -1.28
VARSP26640 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 RNU6-89P-201ENST00000606519 100 ntBASIC7.08□□□□□ -1.28
VARSP26640 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.08□□□□□ -1.28
VARSP26640 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.08□□□□□ -1.28
VARSP26640 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.08□□□□□ -1.28
VARSP26640 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARSP26640 AC127070.3-201ENST00000503695 3263 ntBASIC7.07□□□□□ -1.28
VARSP26640 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARSP26640 ASNSP3-201ENST00000451989 1306 ntBASIC7.07□□□□□ -1.28
VARSP26640 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARSP26640 AP004289.2-201ENST00000444413 1457 ntBASIC7.07□□□□□ -1.28
VARSP26640 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARSP26640 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VARSP26640 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARSP26640 Y_RNA.100-201ENST00000363141 102 ntBASIC7.07□□□□□ -1.28
VARSP26640 SNORA62.2-201ENST00000364672 152 ntBASIC7.07□□□□□ -1.28
VARSP26640 RNU6-169P-201ENST00000365336 107 ntBASIC7.07□□□□□ -1.28
VARSP26640 RNU6-996P-201ENST00000365438 107 ntBASIC7.07□□□□□ -1.28
VARSP26640 SNORD3H-201ENST00000384486 214 ntBASIC7.07□□□□□ -1.28
VARSP26640 MIR1-2-201ENST00000384961 85 ntBASIC7.07□□□□□ -1.28
VARSP26640 SNORD37.1-201ENST00000390968 65 ntBASIC7.07□□□□□ -1.28
VARSP26640 AL359634.1-202ENST00000404721 284 ntBASIC7.07□□□□□ -1.28
VARSP26640 RN7SKP106-201ENST00000410832 272 ntBASIC7.07□□□□□ -1.28
VARSP26640 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.07□□□□□ -1.28
VARSP26640 RPS6P23-201ENST00000413224 722 ntBASIC7.07□□□□□ -1.28
VARSP26640 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 VDAC2P3-201ENST00000430995 828 ntBASIC7.07□□□□□ -1.28
VARSP26640 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 GPR143P-201ENST00000434155 205 ntBASIC7.07□□□□□ -1.28
VARSP26640 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 RPS3AP54-201ENST00000435535 734 ntBASIC7.07□□□□□ -1.28
VARSP26640 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.07□□□□□ -1.28
VARSP26640 RPS24P13-201ENST00000442520 397 ntBASIC7.07□□□□□ -1.28
VARSP26640 HIGD1AP8-201ENST00000453927 274 ntBASIC7.07□□□□□ -1.28
VARSP26640 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VARSP26640 RN7SL392P-201ENST00000473024 299 ntBASIC7.07□□□□□ -1.28
VARSP26640 AL163973.1-201ENST00000484753 577 ntBASIC7.07□□□□□ -1.28
VARSP26640 AC083904.1-201ENST00000487828 231 ntBASIC7.07□□□□□ -1.28
VARSP26640 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.07□□□□□ -1.28
VARSP26640 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.07□□□□□ -1.28
VARSP26640 AC008040.4-201ENST00000494834 768 ntBASIC7.07□□□□□ -1.28
VARSP26640 RN7SL612P-201ENST00000497704 295 ntBASIC7.07□□□□□ -1.28
VARSP26640 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.07□□□□□ -1.28
VARSP26640 RNU6-1220P-201ENST00000517126 108 ntBASIC7.07□□□□□ -1.28
VARSP26640 NARSP2-201ENST00000518524 679 ntBASIC7.07□□□□□ -1.28
VARSP26640 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.07□□□□□ -1.28
VARSP26640 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms