Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH3P22223 RNU6-792P-201ENST00000363490 107 ntBASIC4.77□□□□□ -1.65
CDH3P22223 RNA5SP28-201ENST00000363841 119 ntBASIC4.77□□□□□ -1.65
CDH3P22223 MT-TP-201ENST00000387461 68 ntBASIC4.77□□□□□ -1.65
CDH3P22223 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 ATP5F1P2-201ENST00000398143 760 ntBASIC4.77□□□□□ -1.65
CDH3P22223 RNA5SP146-201ENST00000410743 123 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH3P22223 RPA2P2-201ENST00000419698 796 ntBASIC4.77□□□□□ -1.65
CDH3P22223 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH3P22223 AL360081.1-201ENST00000428299 555 ntBASIC4.77□□□□□ -1.65
CDH3P22223 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH3P22223 AC093716.1-201ENST00000435923 377 ntBASIC4.77□□□□□ -1.65
CDH3P22223 SCAND3P1-201ENST00000439854 1060 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 OR52J1P-201ENST00000450596 932 ntBASIC4.77□□□□□ -1.65
CDH3P22223 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH3P22223 IFNWP4-201ENST00000453148 294 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC092324.1-201ENST00000468671 324 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC116562.1-201ENST00000485355 781 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC104629.1-201ENST00000494226 508 ntBASIC4.77□□□□□ -1.65
CDH3P22223 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.77□□□□□ -1.65
CDH3P22223 SUMO1P1-201ENST00000497904 306 ntBASIC4.77□□□□□ -1.65
CDH3P22223 GAPDHP56-201ENST00000506031 988 ntBASIC4.77□□□□□ -1.65
CDH3P22223 MRPS33P2-201ENST00000507850 322 ntBASIC4.77□□□□□ -1.65
CDH3P22223 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 NDUFB4P12-201ENST00000513465 390 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH3P22223 AC019227.1-201ENST00000526902 510 ntBASIC4.77□□□□□ -1.65
CDH3P22223 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 GCSHP4-201ENST00000538792 439 ntBASIC4.77□□□□□ -1.65
CDH3P22223 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 DYNLL1P4-201ENST00000549314 266 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AL512310.9-201ENST00000553311 948 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC090515.3-201ENST00000560431 315 ntBASIC4.77□□□□□ -1.65
CDH3P22223 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 AC015849.2-201ENST00000605738 409 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC034236.3-201ENST00000605999 461 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH3P22223 AC019131.2-201ENST00000609071 870 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC245389.2-201ENST00000616023 576 ntBASIC4.77□□□□□ -1.65
CDH3P22223 MIR1264-201ENST00000616374 69 ntBASIC4.77□□□□□ -1.65
CDH3P22223 AC242843.1-201ENST00000618702 573 ntBASIC4.77□□□□□ -1.65
CDH3P22223 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 AL359715.4-201ENST00000606629 1436 ntBASIC4.77□□□□□ -1.65
CDH3P22223 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 AL592182.3-201ENST00000642132 3304 ntBASIC4.77□□□□□ -1.65
CDH3P22223 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH3P22223 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH3P22223 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH3P22223 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 MAPK10-320ENST00000641462 6696 ntBASIC4.76□□□□□ -1.65
CDH3P22223 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH3P22223 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 RNU6-650P-201ENST00000365658 111 ntBASIC4.76□□□□□ -1.65
CDH3P22223 RNU6-225P-201ENST00000384613 103 ntBASIC4.76□□□□□ -1.65
CDH3P22223 LRRC37BP1-201ENST00000398851 714 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AL121834.1-202ENST00000404494 277 ntBASIC4.76□□□□□ -1.65
CDH3P22223 U3.32-201ENST00000408116 212 ntBASIC4.76□□□□□ -1.65
CDH3P22223 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 AC019050.1-201ENST00000418508 492 ntBASIC4.76□□□□□ -1.65
CDH3P22223 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH3P22223 OR6K4P-201ENST00000423179 955 ntBASIC4.76□□□□□ -1.65
CDH3P22223 RPL12P34-201ENST00000424532 479 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AL049745.1-201ENST00000433953 286 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AC008072.1-201ENST00000434254 824 ntBASIC4.76□□□□□ -1.65
CDH3P22223 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH3P22223 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH3P22223 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.76□□□□□ -1.65
CDH3P22223 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms