Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP1P11387 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP1P11387 RNA5SP446-201ENST00000515955 82 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP1P11387 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 AC090181.2-201ENST00000602975 672 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AC008966.2-201ENST00000606157 453 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AL354950.1-201ENST00000614150 568 ntBASIC5.23□□□□□ -1.57
TOP1P11387 MIR6891-201ENST00000618788 93 ntBASIC5.23□□□□□ -1.57
TOP1P11387 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TOP1P11387 AC104118.1-201ENST00000607625 1589 ntBASIC5.23□□□□□ -1.57
TOP1P11387 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TOP1P11387 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TOP1P11387 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
TOP1P11387 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TOP1P11387 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.23□□□□□ -1.57
TOP1P11387 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
TOP1P11387 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.22□□□□□ -1.57
TOP1P11387 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.22□□□□□ -1.57
TOP1P11387 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 RNA5SP509-201ENST00000364577 119 ntBASIC5.22□□□□□ -1.57
TOP1P11387 SNORA62-201ENST00000365493 153 ntBASIC5.22□□□□□ -1.57
TOP1P11387 RNU4-25P-201ENST00000410569 230 ntBASIC5.22□□□□□ -1.57
TOP1P11387 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP1P11387 RPL21P108-201ENST00000413857 481 ntBASIC5.22□□□□□ -1.57
TOP1P11387 SNRPFP1-201ENST00000414761 252 ntBASIC5.22□□□□□ -1.57
TOP1P11387 MTND4LP13-201ENST00000425022 298 ntBASIC5.22□□□□□ -1.57
TOP1P11387 C4BPAP2-201ENST00000428434 478 ntBASIC5.22□□□□□ -1.57
TOP1P11387 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.22□□□□□ -1.57
TOP1P11387 AC073143.1-201ENST00000436316 395 ntBASIC5.22□□□□□ -1.57
TOP1P11387 MTND6P18-201ENST00000439477 513 ntBASIC5.22□□□□□ -1.57
TOP1P11387 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP1P11387 RPL21P6-201ENST00000479171 504 ntBASIC5.22□□□□□ -1.57
TOP1P11387 RN7SL810P-201ENST00000493031 276 ntBASIC5.22□□□□□ -1.57
TOP1P11387 AC093840.1-201ENST00000511599 336 ntBASIC5.22□□□□□ -1.57
TOP1P11387 RNU4-18P-201ENST00000516751 149 ntBASIC5.22□□□□□ -1.57
TOP1P11387 AC010476.1-201ENST00000519111 851 ntBASIC5.22□□□□□ -1.57
TOP1P11387 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.22□□□□□ -1.57
TOP1P11387 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.22□□□□□ -1.57
TOP1P11387 EIF4EP5-201ENST00000528228 640 ntBASIC5.22□□□□□ -1.57
TOP1P11387 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.22□□□□□ -1.57
TOP1P11387 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.22□□□□□ -1.57
TOP1P11387 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 MIR6758-201ENST00000620653 63 ntBASIC5.22□□□□□ -1.57
TOP1P11387 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
TOP1P11387 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TOP1P11387 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TOP1P11387 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP1P11387 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TOP1P11387 AC093535.2-201ENST00000624769 2326 ntBASIC5.22□□□□□ -1.57
TOP1P11387 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
TOP1P11387 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TOP1P11387 OR5P1P-201ENST00000299512 925 ntBASIC5.21□□□□□ -1.58
TOP1P11387 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TOP1P11387 RNU4-7P-201ENST00000364758 141 ntBASIC5.21□□□□□ -1.58
TOP1P11387 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TOP1P11387 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TOP1P11387 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.21□□□□□ -1.58
TOP1P11387 NCSTNP1-201ENST00000406229 144 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP1P11387 P2RY10P2-201ENST00000416730 913 ntBASIC5.21□□□□□ -1.58
TOP1P11387 ARAFP1-201ENST00000422172 605 ntBASIC5.21□□□□□ -1.58
TOP1P11387 CHIAP3-201ENST00000423668 1133 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AC011998.1-201ENST00000433403 117 ntBASIC5.21□□□□□ -1.58
TOP1P11387 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TOP1P11387 FHP1-201ENST00000442741 703 ntBASIC5.21□□□□□ -1.58
TOP1P11387 PTMAP3-201ENST00000447474 330 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.21□□□□□ -1.58
TOP1P11387 AC243772.1-201ENST00000451620 410 ntBASIC5.21□□□□□ -1.58
TOP1P11387 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.21□□□□□ -1.58
TOP1P11387 DHFRP3-201ENST00000455595 559 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP1P11387 RPS27AP17-201ENST00000463344 455 ntBASIC5.21□□□□□ -1.58
TOP1P11387 RN7SL41P-201ENST00000476144 297 ntBASIC5.21□□□□□ -1.58
TOP1P11387 RPS27AP16-201ENST00000492222 470 ntBASIC5.21□□□□□ -1.58
TOP1P11387 RNA5SP497-201ENST00000516081 97 ntBASIC5.21□□□□□ -1.58
TOP1P11387 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.21□□□□□ -1.58
TOP1P11387 AC109635.6-201ENST00000525487 1113 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.21□□□□□ -1.58
TOP1P11387 AC091979.2-201ENST00000607514 214 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AL445423.1-201ENST00000609941 536 ntBASIC5.21□□□□□ -1.58
TOP1P11387 AL121890.3-201ENST00000618494 516 ntBASIC5.21□□□□□ -1.58
TOP1P11387 NXPH1-205ENST00000602349 1953 ntBASIC5.21□□□□□ -1.58
TOP1P11387 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP1P11387 Z95327.2-201ENST00000414579 1873 ntBASIC5.21□□□□□ -1.58
TOP1P11387 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP1P11387 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP1P11387 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TOP1P11387 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.21□□□□□ -1.58
TOP1P11387 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.2□□□□□ -1.58
TOP1P11387 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms