Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
FREM3P0C091 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.87□□□□□ -1.79
FREM3P0C091 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.87□□□□□ -1.79
FREM3P0C091 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
FREM3P0C091 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FREM3P0C091 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 MIR134-201ENST00000385258 73 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.87□□□□□ -1.79
FREM3P0C091 SERPINA7P1-201ENST00000443077 631 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 RPL10P17-201ENST00000453852 316 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.87□□□□□ -1.79
FREM3P0C091 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
FREM3P0C091 RPL35AP15-201ENST00000468042 339 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 AC007537.2-201ENST00000472093 511 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FREM3P0C091 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.87□□□□□ -1.79
FREM3P0C091 TPT1P3-201ENST00000492841 512 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 AC025554.1-201ENST00000505641 188 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 RNA5SP519-201ENST00000516480 119 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FREM3P0C091 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.87□□□□□ -1.79
FREM3P0C091 AL031666.3-201ENST00000609320 1006 ntBASIC3.87□□□□□ -1.79
FREM3P0C091 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.87□□□□□ -1.79
FREM3P0C091 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.86□□□□□ -1.79
FREM3P0C091 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 KRT19P6-201ENST00000510983 209 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 NPM1P21-201ENST00000513394 762 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 PHBP17-201ENST00000528576 541 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 OR5BC1P-201ENST00000529327 739 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 AC110743.1-201ENST00000584870 478 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 AC090220.1-201ENST00000593078 1699 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.86□□□□□ -1.79
FREM3P0C091 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.86□□□□□ -1.79
FREM3P0C091 RNU1-14P-201ENST00000362759 152 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 SSR1P1-201ENST00000407630 814 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 SNORA11-201ENST00000408789 128 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.86□□□□□ -1.79
FREM3P0C091 RNA5SP146-201ENST00000410743 123 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 SNORA74C-2-201ENST00000411179 201 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 RPS23P10-201ENST00000416185 486 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.86□□□□□ -1.79
FREM3P0C091 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 GEMIN8P3-201ENST00000445417 720 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 MTCO1P35-201ENST00000515270 228 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.86□□□□□ -1.79
FREM3P0C091 HMGN2P47-201ENST00000559378 272 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.86□□□□□ -1.79
FREM3P0C091 AL138721.1-201ENST00000616756 179 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 HCFC2P1-201ENST00000392864 1592 ntBASIC3.86□□□□□ -1.79
FREM3P0C091 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FREM3P0C091 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
FREM3P0C091 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC099654.3-201ENST00000447087 1546 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.79
FREM3P0C091 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.85□□□□□ -1.79
FREM3P0C091 EIF4EP1-201ENST00000422311 642 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 ARL4AP3-201ENST00000441452 574 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 UQCRHP4-201ENST00000471686 272 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 RPL21P6-201ENST00000479171 504 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.85□□□□□ -1.79
FREM3P0C091 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC090151.1-201ENST00000520784 730 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AL021997.2-201ENST00000615674 271 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
FREM3P0C091 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms