Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC6P09630 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC6P09630 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 MTND2P17-201ENST00000550281 688 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC6P09630 MIR4660-201ENST00000583549 74 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC6P09630 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC6P09630 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 AC009948.4-201ENST00000604692 675 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 KATNBL1P5-201ENST00000605015 517 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AC096586.2-201ENST00000610260 441 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXC6P09630 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 AC009643.2-201ENST00000603543 1448 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 UGT2B26P-201ENST00000508672 1613 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 ICE2P1-201ENST00000512800 1849 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 AL645568.2-201ENST00000432815 1337 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC6P09630 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC106754.1-201ENST00000562632 1513 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 RNA5SP187-201ENST00000384400 119 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 U3.23-201ENST00000391132 200 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC013429.2-201ENST00000418798 781 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 RPL7AP25-201ENST00000423357 805 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 VTI1BP4-201ENST00000427516 527 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC6P09630 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC6P09630 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC093166.2-201ENST00000455969 1017 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 RPL7P32-201ENST00000457119 744 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 CYCSP34-201ENST00000458172 304 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC135999.1-201ENST00000478962 479 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 RNU6-334P-201ENST00000517072 102 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 Y_RNA.717-201ENST00000517106 92 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC074029.2-201ENST00000551045 634 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AL132657.2-201ENST00000564417 358 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC6P09630 BNIP3P38-201ENST00000601117 544 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC067959.1-201ENST00000604334 379 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 OR7A19P-201ENST00000608051 733 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC6P09630 AP003499.2-201ENST00000624100 483 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC6P09630 AC073136.1-201ENST00000449426 2884 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC104623.2-202ENST00000623477 4002 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 AC025031.4-201ENST00000621248 3271 ntBASIC5.3□□□□□ -1.56
HOXC6P09630 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC6P09630 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 AC009501.3-201ENST00000605001 1352 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 AC093671.1-201ENST00000624981 2929 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC6P09630 SNORD51.1-201ENST00000365405 77 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 RNU6-650P-201ENST00000365658 111 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 SNORA70C-201ENST00000384538 135 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AF228730.1-201ENST00000397972 663 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 NPM1P37-201ENST00000403105 874 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 TMBIM7P-201ENST00000418074 855 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL358176.3-201ENST00000420757 454 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC6P09630 RAD23BP1-201ENST00000421404 1227 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 MTND4P24-201ENST00000424002 397 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC6P09630 RPS29P17-201ENST00000430795 166 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL392003.1-201ENST00000434394 243 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC6P09630 RPL35AP21-201ENST00000437667 333 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC6P09630 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC6P09630 AL139824.2-201ENST00000458731 1095 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 SCARNA10-201ENST00000459255 330 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 RN7SL810P-201ENST00000493031 276 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXC6P09630 YWHAZP1-201ENST00000556286 722 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 MTND3P12-201ENST00000559068 328 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AC068620.3-201ENST00000602749 560 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXC6P09630 AC023762.1-201ENST00000603280 584 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms