Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 RN7SKP159-201ENST00000410657 292 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC108032.1-201ENST00000416706 207 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.13□□□□□ -1.59
COL1A1P02452 AC007389.2-201ENST00000434630 306 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.13□□□□□ -1.59
COL1A1P02452 AC146944.2-203ENST00000502493 354 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC108145.1-201ENST00000503770 153 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.13□□□□□ -1.59
COL1A1P02452 FTH1P21-201ENST00000512179 511 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC139495.1-202ENST00000513164 354 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.13□□□□□ -1.59
COL1A1P02452 AC090151.1-201ENST00000520784 730 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 OR7E10P-201ENST00000526420 991 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC006064.5-201ENST00000541782 248 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 MIR6875-201ENST00000617506 72 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL1A1P02452 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.13□□□□□ -1.59
COL1A1P02452 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL1A1P02452 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL1A1P02452 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 MIR208A-201ENST00000362287 71 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 MIR670-201ENST00000390142 98 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AL078604.1-201ENST00000404609 466 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 TPT1P2-201ENST00000413105 503 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.13□□□□□ -1.59
COL1A1P02452 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.13□□□□□ -1.59
COL1A1P02452 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.13□□□□□ -1.59
COL1A1P02452 KCTD9P2-201ENST00000512203 1013 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 NPM1P41-201ENST00000512920 831 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 MTND4LP31-201ENST00000514859 294 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.13□□□□□ -1.59
COL1A1P02452 OR5D2P-201ENST00000524390 911 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 AC039056.2-201ENST00000622261 511 ntBASIC5.13□□□□□ -1.59
COL1A1P02452 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL1A1P02452 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.13□□□□□ -1.59
COL1A1P02452 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.12□□□□□ -1.59
COL1A1P02452 AC008079.2-201ENST00000623543 20396 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
COL1A1P02452 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 AL513548.1-201ENST00000562904 1724 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 RN7SKP186-201ENST00000365371 303 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 SNORD66.1-201ENST00000391230 76 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 SNORA11.1-201ENST00000408133 129 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.12□□□□□ -1.59
COL1A1P02452 RPL7P2-201ENST00000427639 268 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.12□□□□□ -1.59
COL1A1P02452 RN7SKP46-201ENST00000515942 234 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.12□□□□□ -1.59
COL1A1P02452 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 AC022655.2-201ENST00000577280 318 ntBASIC5.12□□□□□ -1.59
COL1A1P02452 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COL1A1P02452 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL1A1P02452 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COL1A1P02452 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.11□□□□□ -1.59
COL1A1P02452 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL1A1P02452 RN7SKP182-201ENST00000410772 298 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 AC004448.2-201ENST00000422360 586 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.11□□□□□ -1.59
COL1A1P02452 ABCF2P2-201ENST00000450549 296 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL1A1P02452 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.11□□□□□ -1.59
COL1A1P02452 RPL23AP81-201ENST00000455252 467 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 SCARNA13-201ENST00000516672 275 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 CYCSP28-201ENST00000534284 321 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 MIR4298-201ENST00000584380 73 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.11□□□□□ -1.59
COL1A1P02452 AC008739.3-201ENST00000603262 127 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.11□□□□□ -1.59
COL1A1P02452 AC010608.2-201ENST00000624830 470 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
COL1A1P02452 RLIMP1-201ENST00000339626 1680 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms