Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.5□□□□□ -1.69
PRKNO60260 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.5□□□□□ -1.69
PRKNO60260 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC105031.1-201ENST00000518550 476 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.5□□□□□ -1.69
PRKNO60260 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.5□□□□□ -1.69
PRKNO60260 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.5□□□□□ -1.69
PRKNO60260 UBE2FP2-201ENST00000566646 462 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AP001160.4-201ENST00000596971 382 ntBASIC4.5□□□□□ -1.69
PRKNO60260 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PRKNO60260 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.5□□□□□ -1.69
PRKNO60260 AL357094.1-201ENST00000603845 844 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AL157392.4-201ENST00000609756 345 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC087683.2-201ENST00000611384 326 ntBASIC4.5□□□□□ -1.69
PRKNO60260 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 AC083865.1-201ENST00000636634 831 ntBASIC4.5□□□□□ -1.69
PRKNO60260 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.5□□□□□ -1.69
PRKNO60260 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 HSPA8P14-201ENST00000552265 1805 ntBASIC4.5□□□□□ -1.69
PRKNO60260 TTC39DP-201ENST00000416781 1688 ntBASIC4.5□□□□□ -1.69
PRKNO60260 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.49□□□□□ -1.69
PRKNO60260 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PRKNO60260 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 RNU6-1263P-201ENST00000384601 106 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 ANAPC10P1-201ENST00000395991 556 ntBASIC4.49□□□□□ -1.69
PRKNO60260 RN7SKP199-201ENST00000410325 305 ntBASIC4.49□□□□□ -1.69
PRKNO60260 RSU1P3-201ENST00000412878 835 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AL121878.1-201ENST00000418638 859 ntBASIC4.49□□□□□ -1.69
PRKNO60260 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 AL645608.4-201ENST00000423619 154 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AC005189.1-201ENST00000431286 310 ntBASIC4.49□□□□□ -1.69
PRKNO60260 ARF4P4-201ENST00000439608 520 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.49□□□□□ -1.69
PRKNO60260 AC025459.1-201ENST00000504072 156 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.49□□□□□ -1.69
PRKNO60260 CDH12P2-201ENST00000504393 298 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 FTH1P11-201ENST00000517577 551 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC091163.3-201ENST00000518269 1144 ntBASIC4.49□□□□□ -1.69
PRKNO60260 HIGD1AP18-201ENST00000520730 278 ntBASIC4.49□□□□□ -1.69
PRKNO60260 OR8G5-201ENST00000524943 1041 ntBASIC4.49□□□□□ -1.69
PRKNO60260 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.49□□□□□ -1.69
PRKNO60260 AL359219.2-201ENST00000555184 348 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.49□□□□□ -1.69
PRKNO60260 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 MIR4700-201ENST00000578311 74 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC006272.2-201ENST00000594725 163 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AL022394.1-201ENST00000606979 292 ntBASIC4.49□□□□□ -1.69
PRKNO60260 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 BX005214.3-202ENST00000619809 325 ntBASIC4.49□□□□□ -1.69
PRKNO60260 AC073869.10-201ENST00000642016 354 ntBASIC4.49□□□□□ -1.69
PRKNO60260 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 NCLP2-201ENST00000416078 1462 ntBASIC4.49□□□□□ -1.69
PRKNO60260 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRKNO60260 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PRKNO60260 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 AL672167.1-203ENST00000641299 2975 ntBASIC4.48□□□□□ -1.69
PRKNO60260 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 AC010928.1-201ENST00000592477 1447 ntBASIC4.48□□□□□ -1.69
PRKNO60260 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms