Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC005086.4-201ENST00000623065 213 ntBASIC4.97□□□□□ -1.61
O00370 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
O00370 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
O00370 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
O00370 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.97□□□□□ -1.61
O00370 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 AC000123.3-201ENST00000624029 4975 ntBASIC4.96□□□□□ -1.61
O00370 LINC01355-201ENST00000566551 5444 ntBASIC4.96□□□□□ -1.61
O00370 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
O00370 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 AC009501.3-201ENST00000605001 1352 ntBASIC4.96□□□□□ -1.62
O00370 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 RN7SKP103-201ENST00000363848 320 ntBASIC4.96□□□□□ -1.62
O00370 RNU6-40P-201ENST00000384254 107 ntBASIC4.96□□□□□ -1.62
O00370 MIR195-201ENST00000385194 87 ntBASIC4.96□□□□□ -1.62
O00370 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
O00370 AL080315.1-201ENST00000406055 466 ntBASIC4.96□□□□□ -1.62
O00370 RN7SKP267-201ENST00000410381 285 ntBASIC4.96□□□□□ -1.62
O00370 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.96□□□□□ -1.62
O00370 AC006466.1-201ENST00000438721 289 ntBASIC4.96□□□□□ -1.62
O00370 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 RPL7AP28-201ENST00000464513 571 ntBASIC4.96□□□□□ -1.62
O00370 AC006967.1-201ENST00000467608 589 ntBASIC4.96□□□□□ -1.62
O00370 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.96□□□□□ -1.62
O00370 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.96□□□□□ -1.62
O00370 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 AC079075.1-201ENST00000559543 878 ntBASIC4.96□□□□□ -1.62
O00370 ATP5J2P6-201ENST00000565203 266 ntBASIC4.96□□□□□ -1.62
O00370 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.96□□□□□ -1.62
O00370 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.96□□□□□ -1.62
O00370 AL359757.1-201ENST00000623176 255 ntBASIC4.96□□□□□ -1.62
O00370 AL136164.3-201ENST00000624429 3978 ntBASIC4.96□□□□□ -1.62
O00370 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
O00370 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
O00370 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
O00370 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
O00370 MAPK10-263ENST00000641052 4307 ntBASIC4.96□□□□□ -1.62
O00370 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
O00370 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.96□□□□□ -1.62
O00370 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
O00370 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
O00370 AC103591.2-201ENST00000265259 766 ntBASIC4.95□□□□□ -1.62
O00370 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
O00370 Y_RNA.110-201ENST00000363220 99 ntBASIC4.95□□□□□ -1.62
O00370 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 MIR585-201ENST00000384887 94 ntBASIC4.95□□□□□ -1.62
O00370 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
O00370 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.95□□□□□ -1.62
O00370 AL139128.1-201ENST00000413921 941 ntBASIC4.95□□□□□ -1.62
O00370 RPL17P35-201ENST00000432217 549 ntBASIC4.95□□□□□ -1.62
O00370 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
O00370 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 APOOP2-201ENST00000461561 539 ntBASIC4.95□□□□□ -1.62
O00370 RPL23AP37-201ENST00000479658 549 ntBASIC4.95□□□□□ -1.62
O00370 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.95□□□□□ -1.62
O00370 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.95□□□□□ -1.62
O00370 CKS1BP1-201ENST00000555221 240 ntBASIC4.95□□□□□ -1.62
O00370 GLRXP2-201ENST00000555594 321 ntBASIC4.95□□□□□ -1.62
O00370 AC015912.2-201ENST00000571053 181 ntBASIC4.95□□□□□ -1.62
O00370 TMF1P1-201ENST00000576058 373 ntBASIC4.95□□□□□ -1.62
O00370 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.95□□□□□ -1.62
O00370 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 MIR4270-201ENST00000581799 70 ntBASIC4.95□□□□□ -1.62
O00370 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.95□□□□□ -1.62
O00370 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.95□□□□□ -1.62
O00370 AC130352.1-201ENST00000602979 661 ntBASIC4.95□□□□□ -1.62
O00370 MTCO2P22-201ENST00000603246 681 ntBASIC4.95□□□□□ -1.62
O00370 AC005972.3-201ENST00000606304 481 ntBASIC4.95□□□□□ -1.62
O00370 AL136295.6-201ENST00000610486 658 ntBASIC4.95□□□□□ -1.62
O00370 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
O00370 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.94□□□□□ -1.62
O00370 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
O00370 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
O00370 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
O00370 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms