Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 EIF4A1P7-201ENST00000421800 1220 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RBMY1KP-201ENST00000423480 476 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NPM1P48-201ENST00000436002 853 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 CYCSP43-201ENST00000438233 310 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RPL23AP52-201ENST00000439311 478 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 OR7E125P-201ENST00000443450 846 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 PPIAP27-201ENST00000453800 265 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 DNAJC19P1-201ENST00000455312 319 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC068228.1-201ENST00000461723 211 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC078817.1-201ENST00000492623 435 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC114324.2-202ENST00000503812 134 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC122718.2-201ENST00000505325 591 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS4XP20-201ENST00000505751 772 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 BTF3L4P4-201ENST00000506381 449 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC026784.1-201ENST00000507986 352 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 HMGN1P16-201ENST00000508308 283 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 UBE2NP1-201ENST00000545592 458 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC008011.1-201ENST00000545989 227 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 BLZF2P-201ENST00000553776 1130 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC124068.1-201ENST00000563131 678 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RPL10P14-201ENST00000565265 298 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL657P-201ENST00000582431 293 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR6749-201ENST00000617008 69 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC129778.1-202ENST00000623812 261 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC007683.2-201ENST00000624681 714 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL591379.1-207ENST00000635982 261 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AMYH02020865.1-205ENST00000636189 261 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC118273.1-201ENST00000525324 3006 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 CUL4AP1-201ENST00000514750 1863 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL079305.1-201ENST00000623159 3008 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC017002.4-201ENST00000604721 1525 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC136624.1-201ENST00000400791 413 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 HSPE1P26-201ENST00000405341 275 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 RPL31P12-201ENST00000422587 358 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 TNPO1P1-201ENST00000423641 1138 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 BX323845.3-201ENST00000428215 527 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 BX323845.1-201ENST00000432417 179 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC096638.2-201ENST00000434965 711 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC019185.1-201ENST00000442718 389 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 IGHV5-78-201ENST00000450948 295 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC083982.1-201ENST00000485679 344 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 IGLV2-34-201ENST00000490007 283 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL362P-201ENST00000494228 267 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AK4P6-201ENST00000505168 528 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC025458.1-201ENST00000506046 166 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 AC007016.1-201ENST00000512110 244 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU1-6P-201ENST00000516290 144 ntBASIC2.34□□□□□ -2.03
CHKB-CPT1BH3BT56 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms