Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AL590392.1-201ENST00000604960 446 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC015914.2-201ENST00000618167 288 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 AC011944.2-201ENST00000624440 683 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 HPVC1-201ENST00000629899 1198 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 CCT8P1-201ENST00000413611 1657 ntBASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NEDD8-MDP1E9PL57 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC233289.1-201ENST00000403700 508 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 TMSB10P2-201ENST00000416049 131 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC012519.1-201ENST00000424588 610 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ZFAND6P1-201ENST00000434138 605 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 GSTA7P-201ENST00000438425 448 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 MTCO3P43-201ENST00000440974 771 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC104651.2-201ENST00000447549 528 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 PCNAP1-201ENST00000505363 709 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ACTR6P1-201ENST00000514311 1104 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 RN7SKP34-201ENST00000516142 244 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC067904.2-201ENST00000517322 1283 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AP003168.1-201ENST00000530091 307 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC008126.1-201ENST00000549019 480 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 ATP5J2P6-201ENST00000565203 266 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 MIR4675-201ENST00000577898 77 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC091979.2-201ENST00000607514 214 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC020634.1-201ENST00000608701 549 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 RMST_5.1-201ENST00000618704 126 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AC022106.2-201ENST00000620114 757 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC00216-201ENST00000623548 1126 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 AL672167.1-204ENST00000641875 3017 ntBASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEDD8-MDP1E9PL57 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD8-MDP1E9PL57 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEDD8-MDP1E9PL57 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NEDD8-MDP1E9PL57 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.65□□□□□ -1.66
NEDD8-MDP1E9PL57 RNU6-883P-201ENST00000384597 107 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL21P108-201ENST00000413857 481 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 SNRPFP1-201ENST00000414761 252 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC019070.1-201ENST00000415008 1024 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 PTP4A1P1-201ENST00000420539 515 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 GAPDHP49-201ENST00000421421 961 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC234779.1-201ENST00000425910 285 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 RSL24D1P6-201ENST00000426934 401 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL157884.3-201ENST00000448273 1184 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 RPS6P2-201ENST00000454208 705 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL591473.1-201ENST00000464297 313 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC106806.2-201ENST00000509365 500 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC138938.1-201ENST00000515431 782 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 MTND2P7-201ENST00000521337 640 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC138701.1-201ENST00000524329 714 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL358913.1-201ENST00000554342 121 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL133370.2-201ENST00000619934 439 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AL162233.1-201ENST00000620014 944 ntBASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.65□□□□□ -1.67
NEDD8-MDP1E9PL57 AC006840.1-201ENST00000623069 542 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms