Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC022832.1-201ENST00000530718 645 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC125612.1-201ENST00000547580 377 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC090502.2-201ENST00000549267 280 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 H3F3BP2-201ENST00000583907 357 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL442067.2-201ENST00000614033 363 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 BX005040.2-201ENST00000620504 370 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC006504.8-201ENST00000621046 635 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC006328.2-201ENST00000623198 397 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC012005.2-201ENST00000624333 397 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 AC087516.1-201ENST00000561236 2428 ntBASIC5.65□□□□□ -1.51
SHISA3A0PJX4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.65□□□□□ -1.51
SHISA3A0PJX4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC023245.2-201ENST00000530760 2978 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 CASC19-204ENST00000641001 2055 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 OR10D1P-201ENST00000355343 936 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 RNU6-777P-201ENST00000364265 104 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 FDPSP5-201ENST00000399474 1057 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 RNU6-195P-201ENST00000411352 109 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 JKAMPP1-201ENST00000413804 919 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MTND3P17-201ENST00000416968 344 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 SPATA20P1-201ENST00000423089 438 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 VDAC2P3-201ENST00000430995 828 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 CBX1P4-201ENST00000439415 457 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 ARPC3P5-201ENST00000448802 534 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 VN1R38P-201ENST00000450265 887 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 SNORA35.1-201ENST00000458908 128 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 RN7SL654P-201ENST00000479178 292 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC008629.2-201ENST00000503783 483 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC091965.3-201ENST00000506236 208 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.672-201ENST00000516289 104 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 SCARNA18.2-201ENST00000516882 84 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 IGLC4-201ENST00000517690 248 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 IGKV2-19-201ENST00000518132 283 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AP000790.1-201ENST00000528891 737 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC090651.1-201ENST00000567865 634 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MIR3189-201ENST00000578735 73 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AL451049.1-201ENST00000608672 497 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC093788.1-201ENST00000609356 927 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AL031777.2-201ENST00000611953 196 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 uc_338.9-201ENST00000617424 182 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AP006248.2-201ENST00000623309 592 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AL132640.3-201ENST00000630473 177 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 AC073488.9-201ENST00000631601 754 ntBASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SHISA3A0PJX4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms