Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 RNU1-20P-201ENST00000363314 162 ntBASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 MIR7-3-201ENST00000384898 110 ntBASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 BX119904.3-201ENST00000428194 957 ntBASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SHANK2Q9UPX8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SHANK2Q9UPX8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 RNA5SP175-201ENST00000364275 119 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 MIR491-201ENST00000384877 84 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 HMGN2P27-201ENST00000427352 270 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 AL500522.2-201ENST00000448562 343 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 RPL23AP81-201ENST00000455252 467 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 RN7SKP157-201ENST00000516174 282 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 OR7E10P-201ENST00000526420 991 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 SNORA51-201ENST00000606420 132 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SHANK2Q9UPX8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 RNU11-4P-201ENST00000391149 133 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 RN7SKP182-201ENST00000410772 298 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC115285.1-201ENST00000424879 736 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AL035246.1-201ENST00000433554 1255 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC090013.1-201ENST00000485147 480 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 TRMT10BP1-201ENST00000519377 943 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC006064.5-201ENST00000541782 248 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 TVP23BP1-201ENST00000557500 617 ntBASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK2Q9UPX8 AC000374.1-201ENST00000434698 1745 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AL133268.1-201ENST00000405676 1401 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 U3.23-201ENST00000391132 200 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AL031584.1-201ENST00000447169 754 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 KCTD9P2-201ENST00000512203 1013 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AC138938.1-201ENST00000515431 782 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AC096577.2-201ENST00000611455 153 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AC084757.4-201ENST00000616350 526 ntBASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 AC099669.2-201ENST00000616549 437 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms