Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RN7SKP103-201ENST00000363848 320 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 MIR129-1-201ENST00000384972 72 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC097374.1-203ENST00000400783 485 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 TMSB10P2-201ENST00000416049 131 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 RPS26P47-201ENST00000427219 348 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC073335.1-201ENST00000427776 363 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 RPL23AP1-201ENST00000428990 471 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 FTH1P16-201ENST00000435241 552 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 MAPRE1P3-201ENST00000435438 796 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 SERPINA7P1-201ENST00000443077 631 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ATP1B1P1-201ENST00000509767 915 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC063949.1-201ENST00000552900 865 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC100827.5-201ENST00000615883 426 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AC007546.1-201ENST00000619452 559 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 FP325313.1-201ENST00000638228 703 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 OR51C1P-202ENST00000641159 1444 ntBASIC4.38□□□□□ -1.71
TREX1Q9NSU2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TREX1Q9NSU2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 LINC01109-201ENST00000603837 3081 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 SNORD66.1-201ENST00000391230 76 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 RPL23AP59-201ENST00000399415 461 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL136131.1-201ENST00000406079 803 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL139128.1-201ENST00000413921 941 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL158073.1-201ENST00000426848 1104 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 RPL21P126-201ENST00000470049 478 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC022795.1-201ENST00000473808 480 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 OR8G5-201ENST00000524943 1041 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 PHBP17-201ENST00000528576 541 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 OR5BC1P-201ENST00000529327 739 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL121834.1-201ENST00000572284 509 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL596275.2-204ENST00000641628 552 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL596275.2-206ENST00000641957 626 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AL451142.2-201ENST00000429076 2090 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 AC074029.4-201ENST00000624796 1859 ntBASIC4.37□□□□□ -1.71
TREX1Q9NSU2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TREX1Q9NSU2 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 OR5P1P-201ENST00000299512 925 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC011155.1-201ENST00000316512 456 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 MT-RNR1-201ENST00000389680 954 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RPS3AP23-201ENST00000401762 784 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 RPS16P5-201ENST00000406501 404 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 GSTM3P2-201ENST00000412746 530 ntBASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.36□□□□□ -1.71
TREX1Q9NSU2 AC016769.2-201ENST00000414815 475 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms