Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHD8Q9HCK8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CHD8Q9HCK8 SMG1P6-201ENST00000532337 2930 ntBASIC4.09□□□□□ -1.76
CHD8Q9HCK8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHD8Q9HCK8 ARF4P3-201ENST00000397387 509 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 ISCUP1-201ENST00000454451 448 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 RPS20P21-201ENST00000466859 343 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC079064.1-201ENST00000528365 362 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC027455.1-201ENST00000574104 594 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 MIR4325-201ENST00000583049 90 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 CASC19-261ENST00000641853 1638 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC011447.7-201ENST00000624228 1590 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 MIR331-201ENST00000362302 94 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 RN7SKP235-201ENST00000410662 305 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL390879.1-201ENST00000439143 386 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC084824.2-201ENST00000548906 345 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL021997.2-201ENST00000615674 271 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC020656.2-201ENST00000613291 5309 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 RPS26P38-201ENST00000414476 348 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 GAPDHP14-201ENST00000450472 937 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC020893.1-201ENST00000502452 580 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 Vault.1-201ENST00000516474 102 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 Y_RNA.719-201ENST00000517156 106 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC023762.1-201ENST00000603280 584 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 AC005972.3-201ENST00000606304 481 ntBASIC4.08□□□□□ -1.76
CHD8Q9HCK8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD8Q9HCK8 EIF3EP2-201ENST00000423042 1814 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC008079.2-201ENST00000623543 20396 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 RNU6-304P-201ENST00000364855 107 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC098799.3-201ENST00000506095 438 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC116553.2-201ENST00000564203 463 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC120057.2-201ENST00000571520 271 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 FP236240.3-201ENST00000623061 327 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 CEP170P1-201ENST00000502249 4587 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC093671.1-201ENST00000624981 2929 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AC090142.1-201ENST00000465776 462 ntBASIC4.07□□□□□ -1.76
CHD8Q9HCK8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHD8Q9HCK8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms