Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AP000563.1-201ENST00000490865 758 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC091515.1-201ENST00000548110 679 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC145350.1-201ENST00000567426 208 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 PCNAP1-202ENST00000595299 752 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC069307.1-201ENST00000602820 447 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC013444.2-201ENST00000603317 787 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC018618.2-201ENST00000604770 446 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC024940.4-201ENST00000605507 246 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AL445222.1-201ENST00000607259 628 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AP005432.2-201ENST00000608162 586 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AL135786.2-201ENST00000608422 615 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC090527.3-201ENST00000619041 548 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 CYP4F35P-202ENST00000636121 390 ntBASIC5.32□□□□□ -1.56
USP29Q9HBJ7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
USP29Q9HBJ7 MTCO1P18-201ENST00000455518 1419 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 NUDT19P3-201ENST00000404698 555 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 U3.36-201ENST00000408418 213 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RPL34P6-201ENST00000432390 345 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 OR51B8P-201ENST00000449892 769 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 PSMC1P13-201ENST00000458195 985 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RPS18P6-201ENST00000476880 458 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RPS4XP20-201ENST00000505751 772 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC097173.1-201ENST00000505862 819 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RNA5SP303-201ENST00000516192 130 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RN7SKP66-201ENST00000516681 231 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 HIGD1AP18-201ENST00000520730 278 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AL109741.3-201ENST00000561748 592 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC006116.3-201ENST00000592968 361 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC025588.2-201ENST00000604851 466 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AL451049.1-201ENST00000608672 497 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AL121895.2-201ENST00000619558 447 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC010435.1-201ENST00000623353 1177 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC112694.2-201ENST00000623697 768 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AP002967.1-201ENST00000624203 539 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 VPS35P1-201ENST00000563400 1518 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC097461.1-201ENST00000568928 2821 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 AC005005.4-201ENST00000623789 16698 ntBASIC5.31□□□□□ -1.56
USP29Q9HBJ7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP29Q9HBJ7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms