Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 CEACAMP6-201ENST00000452007 574 ntBASIC4.59□□□□□ -1.67
C9orf72Q96LT7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AC111000.3-201ENST00000508057 576 ntBASIC4.59□□□□□ -1.67
C9orf72Q96LT7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 RN7SKP92-201ENST00000517266 244 ntBASIC4.59□□□□□ -1.67
C9orf72Q96LT7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 DHX40P1-201ENST00000588725 1412 ntBASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 U3.53-201ENST00000628922 216 ntBASIC4.59□□□□□ -1.67
C9orf72Q96LT7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
C9orf72Q96LT7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf72Q96LT7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf72Q96LT7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf72Q96LT7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf72Q96LT7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC107027.3-201ENST00000565095 3473 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 SNORA70F-201ENST00000384142 135 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 Z98745.1-201ENST00000402553 494 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AL049697.2-201ENST00000403708 294 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AL078604.1-201ENST00000404609 466 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC062016.2-201ENST00000420950 676 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 RAD23BP1-201ENST00000421404 1227 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 HMGB3P10-201ENST00000434734 572 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 RPL7P33-201ENST00000444159 742 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC092905.1-201ENST00000467527 949 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC007016.1-201ENST00000512110 244 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 MIR378J-201ENST00000611988 109 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 MIR6810-201ENST00000622701 70 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf72Q96LT7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 AC027290.2-201ENST00000623210 18662 ntBASIC4.58□□□□□ -1.68
C9orf72Q96LT7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AL450326.2-201ENST00000421913 1962 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 ATG4AP1-201ENST00000416893 538 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC073136.2-201ENST00000417282 849 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC073335.1-201ENST00000427776 363 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 PTMAP3-201ENST00000447474 330 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 DDX39BP2-208ENST00000453923 258 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 snoU13.1-201ENST00000459157 104 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC079804.1-201ENST00000461922 436 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 C1GALT1P3-201ENST00000522049 819 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 MIR5096-201ENST00000583713 70 ntBASIC4.57□□□□□ -1.68
C9orf72Q96LT7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf72Q96LT7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms