Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC126389.1-201ENST00000477436 290 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 HSPD1P15-201ENST00000505573 1122 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 RNA5SP92-201ENST00000516437 110 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 RN7SKP295-201ENST00000517264 153 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC087752.2-201ENST00000521219 281 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AP005902.1-201ENST00000521358 186 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC107934.1-201ENST00000522215 217 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 IGLVV-66-201ENST00000523818 341 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AP002404.1-201ENST00000532005 451 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 APOOP3-201ENST00000536787 586 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.32□□□□□ -1.24
HLA-CQ95604 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AL356432.3-201ENST00000568952 465 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC011445.2-201ENST00000599274 173 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC063962.1-201ENST00000608199 521 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC109309.2-201ENST00000612597 332 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC133104.2-201ENST00000615272 193 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AL353763.2-201ENST00000623489 1903 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC004972.1-201ENST00000623934 2209 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 TRIM53BP-201ENST00000532912 1720 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-CQ95604 MAPK10-285ENST00000641207 2746 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC011493.1-201ENST00000596753 1632 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 HSPA8P18-201ENST00000439846 1928 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 AC096921.2-201ENST00000561507 1916 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 AL133243.4-201ENST00000623116 3109 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
HLA-CQ95604 Y_RNA.414-201ENST00000384011 101 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 SNORD3H-201ENST00000384486 214 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HLA-CQ95604 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 RN7SKP158-201ENST00000410453 326 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 RNU2-47P-201ENST00000410649 186 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 RNU4-14P-201ENST00000410858 122 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC006548.1-201ENST00000427470 102 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 BRWD1P3-201ENST00000428816 390 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 TXNP1-201ENST00000441872 371 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-CQ95604 RPL21P99-201ENST00000480369 423 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 UBA52P3-201ENST00000491303 382 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 AC090453.1-201ENST00000495560 436 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 RN7SL101P-201ENST00000496350 279 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-CQ95604 RPL39P5-202ENST00000512505 151 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 RNU6-1220P-201ENST00000517126 108 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.31□□□□□ -1.24
HLA-CQ95604 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AL353997.4-201ENST00000586196 166 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 NUTF2P8-201ENST00000604593 363 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AL008723.3-201ENST00000608926 449 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC083806.3-201ENST00000614016 455 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 AL122023.1-201ENST00000622847 530 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 CR381572.1-201ENST00000625098 102 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-CQ95604 CASC19-284ENST00000642142 1868 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 AC092125.1-201ENST00000562568 1995 ntBASIC7.31□□□□□ -1.24
HLA-CQ95604 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
HLA-CQ95604 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms