Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC009039.2-201ENST00000624524 529 ntBASIC5.39□□□□□ -1.55
ATP2A3Q93084 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATP2A3Q93084 CCT8P1-201ENST00000413611 1657 ntBASIC5.39□□□□□ -1.55
ATP2A3Q93084 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATP2A3Q93084 AL450345.1-202ENST00000605741 3881 ntBASIC5.39□□□□□ -1.55
ATP2A3Q93084 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATP2A3Q93084 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.39□□□□□ -1.55
ATP2A3Q93084 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATP2A3Q93084 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATP2A3Q93084 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 STX3-208ENST00000641815 3236 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AP000756.2-201ENST00000624168 2567 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 OR9G4-201ENST00000302957 984 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 RNU6-304P-201ENST00000364855 107 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 RN7SKP216-201ENST00000411050 312 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 NPM1P40-201ENST00000412758 733 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 EI24P4-201ENST00000423683 1078 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 RPS7P2-201ENST00000435134 607 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 MED6P1-201ENST00000439659 713 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 ELOCP10-201ENST00000440624 327 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 NOP56P2-201ENST00000447491 769 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AL591623.2-201ENST00000449978 222 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 CYCSP42-201ENST00000450823 238 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 TPT1P1-201ENST00000458495 518 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 snoU13.20-201ENST00000459180 104 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 RPL21P6-201ENST00000479171 504 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC010374.1-201ENST00000503762 1237 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 MIR4480-201ENST00000582492 71 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AL445435.1-201ENST00000604232 665 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 ELOCP34-201ENST00000604436 327 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC099785.1-201ENST00000605697 437 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 FAM25E-202ENST00000608562 189 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC007342.8-201ENST00000623278 678 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 AC073136.1-201ENST00000449426 2884 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATP2A3Q93084 ADAM5-202ENST00000399789 1942 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 SCARNA15-201ENST00000607520 4325 ntBASIC5.38□□□□□ -1.55
ATP2A3Q93084 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.38□□□□□ -1.55
ATP2A3Q93084 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 SNORA51.8-201ENST00000384234 132 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 ATF1P1-201ENST00000406040 927 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 AC099336.2-201ENST00000422457 254 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 PNRC2P1-201ENST00000423940 420 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 AC104837.2-201ENST00000427236 424 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 AL161722.2-201ENST00000434731 981 ntBASIC5.37□□□□□ -1.55
ATP2A3Q93084 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATP2A3Q93084 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.37□□□□□ -1.55
ATP2A3Q93084 KNOP1P3-201ENST00000446933 426 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms