Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MAPK10-286ENST00000641208 8747 ntBASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CFAP43Q8NDM7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 MIR7-3-201ENST00000384898 110 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 TPT1P2-201ENST00000413105 503 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 SERPINA7P1-201ENST00000443077 631 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 DEFB109F-201ENST00000491870 277 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 GTF2IP22-201ENST00000554443 182 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 MIR3124-201ENST00000582636 67 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 AL357559.1-201ENST00000622228 274 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 AC005086.4-201ENST00000623065 213 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 CASC19-204ENST00000641001 2055 ntBASIC6.71□□□□□ -1.33
CFAP43Q8NDM7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC233968.1-201ENST00000611212 1300 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 NPM1P37-201ENST00000403105 874 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 RNA5SP36-201ENST00000410197 133 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 RPL6P29-201ENST00000414863 865 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 BOLA3P4-201ENST00000418151 400 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 VN1R32P-201ENST00000452234 905 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 RNA5SP73-201ENST00000516744 108 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC002069.2-201ENST00000603580 883 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC099669.2-201ENST00000616549 437 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC007342.8-201ENST00000623278 678 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 AC020978.9-201ENST00000624380 1141 ntBASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
CFAP43Q8NDM7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 MIR491-201ENST00000384877 84 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 NOTCH2P1-201ENST00000443481 624 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 PTMAP3-201ENST00000447474 330 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AC009852.2-201ENST00000567898 485 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AC087499.8-201ENST00000578406 226 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 AP002512.4-202ENST00000641599 4530 ntBASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.7□□□□□ -1.34
CFAP43Q8NDM7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AC115285.1-201ENST00000424879 736 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 RPL7P49-201ENST00000471402 708 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AC119751.5-201ENST00000514077 770 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 MIR5685-201ENST00000579080 79 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AC107982.3-201ENST00000584957 985 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.69□□□□□ -1.34
CFAP43Q8NDM7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 EIF3EP2-201ENST00000423042 1814 ntBASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 RNU1-20P-201ENST00000363314 162 ntBASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 AC108032.1-201ENST00000416706 207 ntBASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 NPM1P21-201ENST00000513394 762 ntBASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP43Q8NDM7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms