Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 ZNF971P-201ENST00000562068 1249 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC027104.1-201ENST00000563702 681 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 MIR3936-201ENST00000584304 110 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 PRPF19P1-201ENST00000584766 898 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 MTCO2P2-201ENST00000591258 225 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC105254.2-201ENST00000603636 436 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC073387.2-201ENST00000604797 784 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 MEMO1P5-201ENST00000604810 406 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL121890.3-201ENST00000618494 516 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 MIR6839-201ENST00000620425 113 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC087385.3-201ENST00000620477 187 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC112694.2-201ENST00000623697 768 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC073869.7-201ENST00000640874 297 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC025574.1-201ENST00000554784 1653 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC093311.1-201ENST00000506586 2021 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC006210.2-201ENST00000367074 1545 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 RN7SKP113-201ENST00000363891 295 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 OR1L6-202ENST00000373684 1044 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 ANAPC10P1-201ENST00000395991 556 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL035419.1-201ENST00000397037 564 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 COX5BP7-201ENST00000414780 274 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 OR2AM1P-201ENST00000422137 422 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 FTH1P16-201ENST00000435241 552 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 PRPF38AP2-201ENST00000438179 851 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL035551.1-201ENST00000446931 348 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 SEPT14P24-201ENST00000447236 180 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL031313.1-201ENST00000448435 256 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC111193.1-201ENST00000504097 155 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC010350.1-201ENST00000504908 231 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 CDH12P4-201ENST00000517835 295 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 CDH12P3-201ENST00000517935 295 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 CDH12P1-201ENST00000518435 295 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AP001207.2-201ENST00000519490 539 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC034205.1-201ENST00000520621 638 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC092709.1-201ENST00000521355 1045 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 EDDM3DP-201ENST00000554692 434 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AP005432.2-201ENST00000608162 586 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AP000770.2-201ENST00000623694 100 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 IRF5P1-201ENST00000504852 2164 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AL731532.2-201ENST00000623542 1953 ntBASIC4.69□□□□□ -1.66
BEST3Q8N1M1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BEST3Q8N1M1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BEST3Q8N1M1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms