Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 RN7SL39P-201ENST00000462264 297 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC012181.1-201ENST00000479895 423 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC023194.1-201ENST00000493084 308 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC104109.1-201ENST00000498563 436 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 GAPDHP56-201ENST00000506031 988 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 MTCO3P44-201ENST00000510977 541 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 SNORA74.1-201ENST00000516320 180 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 RN7SKP31-201ENST00000516354 278 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC009117.1-201ENST00000563948 554 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL589863.1-201ENST00000595383 631 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC245052.7-201ENST00000601161 359 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL953862.2-201ENST00000603089 820 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC111186.1-201ENST00000604684 130 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL161734.1-201ENST00000609720 557 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL589743.6-201ENST00000611025 117 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC132825.8-201ENST00000640783 297 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 MTND5P7-201ENST00000413558 1798 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC012213.2-201ENST00000562917 4597 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AP002370.1-201ENST00000528055 1602 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RN7SKP237-201ENST00000364663 301 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP485-201ENST00000365053 119 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RNU1-55P-201ENST00000365510 158 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RNU6-187P-201ENST00000384139 106 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 MIR142-201ENST00000384835 87 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP198-201ENST00000410376 127 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL451054.2-201ENST00000420896 202 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 NPM1P34-201ENST00000428821 893 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 PRPF38AP2-201ENST00000438179 851 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL512605.1-202ENST00000441919 381 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 MRPS31P2-201ENST00000451581 518 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC099563.1-201ENST00000456086 418 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 Y_RNA.635-201ENST00000459041 101 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC138409.2-202ENST00000507274 458 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 OR52H2P-201ENST00000514607 902 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC006512.2-201ENST00000543250 486 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL078601.3-201ENST00000573303 535 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 NRBF2P1-201ENST00000587407 859 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC005021.1-201ENST00000608730 355 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC096772.1-201ENST00000609146 564 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AL731566.2-201ENST00000618971 317 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 OR1N1-202ENST00000619659 939 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AP006248.2-201ENST00000623309 592 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AP003486.1-201ENST00000525716 3994 ntBASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
NPAS3Q8IXF0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms