Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 ARHGAP42P3-201ENST00000443989 2508 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 HYDIN2-203ENST00000614586 13885 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 RNA5SP22-201ENST00000365393 109 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 RNU11-4P-201ENST00000391149 133 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 RPL21P91-201ENST00000429231 479 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC006994.1-201ENST00000438212 839 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 ACTR3P3-201ENST00000480448 893 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AP003175.1-201ENST00000641383 6658 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC007738.1-201ENST00000413892 348 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC017083.1-201ENST00000428093 483 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 CASC19-204ENST00000641001 2055 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC083899.2-201ENST00000423285 1376 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AL359922.3-201ENST00000624779 1670 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AL360270.2-201ENST00000562952 5985 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 PCNPP4-201ENST00000414817 517 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 SERPINA7P1-201ENST00000443077 631 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 MIR5195-201ENST00000583555 115 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ERCC6-202ENST00000374127 1782 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 RNU6-213P-201ENST00000384051 104 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 MIR200C-201ENST00000384980 68 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 UBDP1-202ENST00000457888 382 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AL354798.1-201ENST00000622505 329 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AL034408.1-202ENST00000636088 415 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD3Q7Z407 AC020656.2-201ENST00000613291 5309 ntBASIC2.91□□□□□ -1.94
CSMD3Q7Z407 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC027228.2-201ENST00000567141 2154 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 OR5BE1P-201ENST00000425977 939 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 CDH12P2-201ENST00000504393 298 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC004069.2-201ENST00000505438 1114 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC006064.5-201ENST00000541782 248 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 YPEL5P3-201ENST00000547227 352 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC120057.2-201ENST00000571520 271 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 OR8G7P-201ENST00000616658 848 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 OR5BE1P-202ENST00000641168 1176 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms