Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MRPS36P3-201ENST00000519284 130 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 DEFB130C-202ENST00000530001 230 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 MTCO1P40-201ENST00000574371 625 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC022884.3-201ENST00000579571 248 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC009237.15-201ENST00000610252 501 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC015914.2-201ENST00000618167 288 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC118658.2-201ENST00000618697 459 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 RNU1-87P-201ENST00000363727 170 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RNA5SP510-201ENST00000364697 99 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 RNU6-549P-201ENST00000384433 107 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RNU6-636P-201ENST00000384598 107 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 RPS24P7-201ENST00000416921 246 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC027644.1-201ENST00000419595 298 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL358176.3-201ENST00000420757 454 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 GTF2IP2-201ENST00000424290 697 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 NANOGP2-201ENST00000435391 727 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RPL35AP21-201ENST00000437667 333 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RPS26P30-201ENST00000443431 335 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 HMGB3P6-201ENST00000444896 598 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RPL36AP39-201ENST00000445859 318 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 MTCYBP11-201ENST00000447254 1109 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC005002.1-201ENST00000447458 540 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 BTF3P6-201ENST00000448054 499 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 SEPT7P3-201ENST00000455017 621 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 RANP1-206ENST00000455094 651 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL133244.1-201ENST00000456007 258 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 HMGB3P16-201ENST00000508037 287 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC138938.1-201ENST00000515431 782 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC012400.1-201ENST00000518452 381 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AP001636.2-201ENST00000525517 696 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 MTATP6P15-201ENST00000527233 835 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 UBTFL10-201ENST00000528532 562 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AP002812.4-201ENST00000532139 286 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 NPM1P47-201ENST00000560843 856 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 ZNF92P3-201ENST00000596594 954 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 NIFKP6-201ENST00000598115 845 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 MTND3P19-201ENST00000603825 345 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 VN1R7P-201ENST00000619242 903 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC013470.4-201ENST00000619978 986 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.62□□□□□ -1.67
SHFQ7M4L6 AC090897.3-201ENST00000636973 1157 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 MTND2P41-201ENST00000637599 773 ntBASIC4.62□□□□□ -1.67
SHFQ7M4L6 SAMMSON-209ENST00000641222 1100 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms