Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC112198.2-201ENST00000426589 6996 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 PDZK1P1-202ENST00000425209 1350 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 STX3-208ENST00000641815 3236 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RNA5SP500-201ENST00000364486 119 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RNU6-178P-201ENST00000384631 104 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 MIR130A-201ENST00000385274 89 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RPL21P67-201ENST00000402896 478 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RNA5SP80-201ENST00000410475 111 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 MTND1P32-201ENST00000433043 938 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC007679.3-201ENST00000434035 414 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 Z99714.1-201ENST00000450463 807 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 ATG12P2-201ENST00000456830 416 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RN7SL57P-201ENST00000493687 290 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 WBP1LP4-201ENST00000505043 344 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 OR5H4P-201ENST00000510851 923 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RNU6-1225P-201ENST00000516336 65 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RNA5SP340-201ENST00000517132 107 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 RN7SKP183-201ENST00000517169 324 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC006530.1-201ENST00000555980 571 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AL132657.2-201ENST00000564417 358 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC005412.1-201ENST00000580812 1049 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 MIR4260-201ENST00000583107 67 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 PRPF19P1-201ENST00000584766 898 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 NF1P5-201ENST00000588287 448 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 BNIP3P24-201ENST00000593398 557 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC010245.2-201ENST00000606908 1167 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AL021707.7-201ENST00000607991 416 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 AP003072.4-201ENST00000624580 310 ntBASIC5.3□□□□□ -1.56
RNF220Q5VTB9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF220Q5VTB9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC126323.6-202ENST00000568092 3511 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC016716.1-201ENST00000265882 708 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC017079.1-201ENST00000333650 415 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RNU6-157P-201ENST00000383957 107 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 TAF9BP1-201ENST00000396646 746 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 PRRC2CP1-201ENST00000404428 159 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL357752.1-201ENST00000412817 349 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RPS6P23-201ENST00000413224 722 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL139421.1-201ENST00000423010 169 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL031736.2-201ENST00000426573 787 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 SETD6P1-201ENST00000444575 317 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC104978.1-201ENST00000449387 391 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC118758.1-202ENST00000454719 225 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RPS23P2-201ENST00000463671 415 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC126121.1-201ENST00000482313 553 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RPS7P6-201ENST00000485777 579 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms