Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.33□□□□□ -1.4
CDC42BPAQ5VT25 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDC42BPAQ5VT25 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 VPS35P1-201ENST00000563400 1518 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 MAPK10-286ENST00000641208 8747 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 RNU6-213P-201ENST00000384051 104 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 AC003985.2-201ENST00000562268 1669 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 THAP12P5-201ENST00000405864 2275 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 AC093591.2-201ENST00000565254 3843 ntBASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDC42BPAQ5VT25 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AL157884.3-201ENST00000448273 1184 ntBASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AC110792.1-201ENST00000491826 472 ntBASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AC000374.1-201ENST00000434698 1745 ntBASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.31□□□□□ -1.4
CDC42BPAQ5VT25 SNORD96B-201ENST00000386148 79 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 PTMAP2-201ENST00000397627 327 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 RPL23AP83-201ENST00000434984 473 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 RPS27AP15-201ENST00000447672 466 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 BNIP3P41-201ENST00000503774 571 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 MIR6075-201ENST00000620782 95 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AL358178.1-201ENST00000407698 397 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 DEFB109A-201ENST00000482450 265 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 RPS4XP15-201ENST00000489210 795 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AL592436.1-201ENST00000605135 558 ntBASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.3□□□□□ -1.4
CDC42BPAQ5VT25 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AC016588.2-201ENST00000632484 3021 ntBASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AL445433.1-201ENST00000457507 257 ntBASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AL591473.1-201ENST00000464297 313 ntBASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 CR392039.5-201ENST00000623201 510 ntBASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDC42BPAQ5VT25 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms