Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC058823.1-201ENST00000485315 474 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 RN7SL423P-201ENST00000486202 304 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.49□□□□□ -1.69
SCN1BQ07699 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SCN1BQ07699 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 GSTP1P1-201ENST00000548078 319 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC005252.1-201ENST00000604518 1063 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AL392112.1-201ENST00000605115 829 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 IMMP1LP1-201ENST00000605170 488 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AL445528.2-201ENST00000620582 470 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SCN1BQ07699 OR52B5P-202ENST00000641118 1110 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC108751.5-201ENST00000492880 1336 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN1BQ07699 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AL512422.1-201ENST00000407033 553 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC004987.3-201ENST00000413879 771 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 FABP7P1-201ENST00000424004 391 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 OR5AW1P-201ENST00000426334 1006 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 COX6CP13-201ENST00000428703 226 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC002069.1-201ENST00000429649 1159 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 UBE2V1P6-201ENST00000430840 422 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AL512637.2-201ENST00000431287 1256 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC012075.1-201ENST00000436549 580 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AL158053.1-201ENST00000441503 453 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 RPS11P7-201ENST00000442125 465 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 HMGB1P48-201ENST00000446155 598 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC108161.1-201ENST00000461060 402 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.48□□□□□ -1.69
SCN1BQ07699 DEFB109F-201ENST00000491870 277 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC005412.2-201ENST00000492004 341 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 RPL7L1P13-201ENST00000511702 739 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 MTND1P36-201ENST00000522384 936 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC005868.1-201ENST00000536421 331 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC024940.3-201ENST00000538551 316 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 RBM22P1-201ENST00000578589 1214 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC000068.2-201ENST00000608816 460 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC112503.2-201ENST00000609005 552 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AP005229.2-201ENST00000609980 697 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 MIR6861-201ENST00000618657 64 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC127024.6-201ENST00000621598 424 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SCN1BQ07699 MAPK10-303ENST00000641324 3959 ntBASIC4.48□□□□□ -1.69
SCN1BQ07699 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SCN1BQ07699 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN1BQ07699 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN1BQ07699 AC046144.1-201ENST00000478559 1853 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SCN1BQ07699 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN1BQ07699 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SCN1BQ07699 RN7SKP104-201ENST00000362605 328 ntBASIC4.47□□□□□ -1.69
SCN1BQ07699 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms